RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 IQCF3P0C7M6 154 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 ZNF286BP0CG31 522 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 PDGFRAP16234 1089 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 PECAM1P16284 738 aaPredicted RBP9.37□□□□□ -0.91
TMEM116-209ENST00000550020 SMPD1P17405 629 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 MIPP30301 263 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 STX2P32856 288 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 GJA5P36382 358 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 CPT1AP50416 773 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 CDH8P55286 799 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 EIF3EP60228 445 aaKnown RBP9.37□□□□□ -0.91
TMEM116-209ENST00000550020 OTUD4Q01804 1114 aaKnown RBP9.37□□□□□ -0.91
TMEM116-209ENST00000550020 ROR1Q01973 937 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 GOLGA7BQ2TAP0 167 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 ATP13A4Q4VNC1 1196 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 LACTB2Q53H82 288 aaPredicted RBP9.37□□□□□ -0.91
TMEM116-209ENST00000550020 RNASEH2BQ5TBB1 312 aaKnown RBP9.37□□□□□ -0.91
TMEM116-209ENST00000550020 DAB2IPQ5VWQ8 1189 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 ARHGAP17Q68EM7 881 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 C6orf89Q6UWU4 347 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 BZW1Q7L1Q6 419 aaKnown RBP9.37□□□□□ -0.91
TMEM116-209ENST00000550020 CDR2LQ86X02 465 aaPredicted RBP9.37□□□□□ -0.91
TMEM116-209ENST00000550020 HACE1Q8IYU2 909 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 NME8Q8N427 588 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 JOSD2Q8TAC2 188 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 CXorf38Q8TB03 319 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 MDM1Q8TC05 714 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 ACTL9Q8TC94 416 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 PYROXD1Q8WU10 500 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 CPB2Q96IY4 423 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 MS4A4AQ96JQ5 239 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 ZNF668Q96K58 619 aaPredicted RBP9.37□□□□□ -0.91
TMEM116-209ENST00000550020 TNIP3Q96KP6 325 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 SNX27Q96L92 541 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 ZNF317Q96PQ6 595 aaPredicted RBP9.37□□□□□ -0.91
TMEM116-209ENST00000550020 SMC6Q96SB8 1091 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 PRMT1Q99873 361 aaKnown RBP9.37□□□□□ -0.91
TMEM116-209ENST00000550020 CALN1Q9BXU9 219 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 KATNBL1Q9H079 304 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 SSU72Q9NP77 194 aaKnown RBP9.37□□□□□ -0.91
TMEM116-209ENST00000550020 Q9Y3F1 56 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 FAM47DPA6NHR8 397 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 A6NJR5 290 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 C2CD4BA6NLJ0 364 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 RASA4BC9J798 803 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 RASA4O43374 803 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 F2P00734 622 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 GSTA2P09210 222 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 DARSP14868 501 aaKnown RBP9.36□□□□□ -0.91
TMEM116-209ENST00000550020 CYP3A5P20815 502 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 PTPN9P43378 593 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 CTCFP49711 727 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-209ENST00000550020 BCAT1P54687 386 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 GEMIN4P57678 1058 aaKnown RBP9.36□□□□□ -0.91
TMEM116-209ENST00000550020 IRX5P78411 483 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-209ENST00000550020 SLC6A3Q01959 620 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 RNASELQ05823 741 aaKnown RBP9.36□□□□□ -0.91
TMEM116-209ENST00000550020 ACTN3Q08043 901 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-209ENST00000550020 PDIA2Q13087 525 aaKnown RBP9.36□□□□□ -0.91
TMEM116-209ENST00000550020 NOMO1Q15155 1222 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 SV2CQ496J9 727 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 ZC3H12AQ5D1E8 599 aaKnown RBP9.36□□□□□ -0.91
TMEM116-209ENST00000550020 CYP4F22Q6NT55 531 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 DARS2Q6PI48 645 aaKnown RBP9.36□□□□□ -0.91
TMEM116-209ENST00000550020 DPH6Q7L8W6 267 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 PIGWQ7Z7B1 504 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 TMEM110Q86TL2 294 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 CDKL3Q8IVW4 592 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-209ENST00000550020 PALM2Q8IXS6 379 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 TMEM192Q8IY95 271 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 CKAP2Q8WWK9 683 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 RXFP2Q8WXD0 754 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 BRI3BPQ8WY22 251 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 HSPH1Q92598 858 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 PRCCQ92733 491 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-209ENST00000550020 APBB2Q92870 758 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 ALKBH8Q96BT7 664 aaKnown RBP9.36□□□□□ -0.91
TMEM116-209ENST00000550020 C9orf72Q96LT7 481 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 MAGEB18Q96M61 343 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 TMEM121Q9BTD3 319 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 SLC4A5Q9BY07 1137 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 AP5M1Q9H0R1 490 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 ADAM7Q9H2U9 754 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 ADAMTS10Q9H324 1103 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 SNX25Q9H3E2 840 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 R3HDMLQ9H3Y0 253 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 ZNF408Q9H9D4 720 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 GBA2Q9HCG7 927 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-209ENST00000550020 CNTN3Q9P232 1028 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 PAK5Q9P286 719 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 PSMC3IPQ9P2W1 217 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-209ENST00000550020 TSPAN16Q9UKR8 245 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 NAALADL1Q9UQQ1 740 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 IKBKGQ9Y6K9 419 aa9.36□□□□□ -0.91
TMEM116-209ENST00000550020 ZSWIM8A7E2V4 1837 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 MBLAC1A4D2B0 266 aaPredicted RBP9.35□□□□□ -0.91
TMEM116-209ENST00000550020 CCT8L1PA6NM43 557 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 APOL1O14791 398 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 TRIM66O15016 1216 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 MDM4O15151 490 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms