RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 GPRIN1Q7Z2K8 1008 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 MON1AQ86VX9 555 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 ZNF687Q8N1G0 1237 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 CRYBG2Q8N1P7 616 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 ARL14EPQ8N8R7 260 aaPredicted RBP10.4□□□□□ -0.74
HDAC7-229ENST00000549883 DTWD2Q8NBA8 298 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 TTC16Q8NEE8 873 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 PJA1Q8NG27 643 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 SLC2A14Q8TDB8 520 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 DEPDC1BQ8WUY9 529 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 SLC35C1Q96A29 364 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 C8orf48Q96LL4 319 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 GCNAQ96QF7 691 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 SMOQ99835 787 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 MED10Q9BTT4 135 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 NIF3L1Q9GZT8 377 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 LTB4R2Q9NPC1 389 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 KRT82Q9NSB4 513 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 SIT1Q9Y3P8 196 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 FAM170BA6NMN3 283 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 DPYSL4O14531 572 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 TNFRSF10BO14763 440 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 SCAMP3O14828 347 aaKnown RBP10.39□□□□□ -0.75
HDAC7-229ENST00000549883 TRIM66O15016 1216 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 CHADO15335 359 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 SLC16A3O15427 465 aaKnown RBP10.39□□□□□ -0.75
HDAC7-229ENST00000549883 CILPO75339 1184 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 ARSAP15289 507 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 RFX1P22670 979 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 ANXA13P27216 316 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 PFKPQ01813 784 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 PRKCQQ04759 706 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 ENPEPQ07075 957 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 INCA1Q0VD86 236 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 LRMPQ12912 555 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 TAF10Q12962 218 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 NAIF1Q69YI7 327 aaPredicted RBP10.39□□□□□ -0.75
HDAC7-229ENST00000549883 TXNDC11Q6PKC3 985 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 YAF2Q8IY57 180 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 FBXL13Q8NEE6 735 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 BPIFB1Q8TDL5 484 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 MRPS31Q92665 395 aaKnown RBP10.39□□□□□ -0.75
HDAC7-229ENST00000549883 DNASE1L2Q92874 299 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 CHFRQ96EP1 664 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 TNIP3Q96KP6 325 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 TTLL2Q9BWV7 592 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 RNF38Q9H0F5 515 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 HPS4Q9NQG7 708 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 GKN1Q9NS71 199 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 LMBRD1Q9NUN5 540 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 RAB20Q9NX57 234 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 KIAA1468Q9P260 1216 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 ARMCX3Q9UH62 379 aaPredicted RBP10.39□□□□□ -0.75
HDAC7-229ENST00000549883 CHORDC1Q9UHD1 332 aaPredicted RBP10.39□□□□□ -0.75
HDAC7-229ENST00000549883 NDRG2Q9UN36 371 aaKnown RBP10.39□□□□□ -0.75
HDAC7-229ENST00000549883 PIAS3Q9Y6X2 628 aa10.39□□□□□ -0.75
HDAC7-229ENST00000549883 FANCMQ8IYD8 2048 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 ZNF840PA6NDX5 716 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 HHLA1C9JL84 531 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 AP1G2O75843 785 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 ABL1P00519 1130 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 CALCAP01258 141 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 P4HA1P13674 534 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 WEE1P30291 646 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 HOXC13P31276 330 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 AVPR1AP37288 418 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 FMO5P49326 533 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 RAD23BP54727 409 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 PTPN5P54829 565 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 MAP3K7CLP57077 242 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 PAK1Q13153 545 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 STIM1Q13586 685 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 ANGPT1Q15389 498 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 CLEC17AQ6ZS10 378 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 FILIP1Q7Z7B0 1213 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 UNC93AQ86WB7 457 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 MAML2Q8IZL2 1156 aaPredicted RBP10.38□□□□□ -0.75
HDAC7-229ENST00000549883 CELF5Q8N6W0 485 aaKnown RBP10.38□□□□□ -0.75
HDAC7-229ENST00000549883 LMO3Q8TAP4 145 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 IRF7Q92985 503 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 KAT5Q92993 513 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 JAKMIP2Q96AA8 810 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 CYFIP2Q96F07 1278 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 SHDQ96IW2 340 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 FAM83CQ9BQN1 747 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 NT5C1AQ9BXI3 368 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 SRRTQ9BXP5 876 aaKnown RBP10.38□□□□□ -0.75
HDAC7-229ENST00000549883 IMPG2Q9BZV3 1241 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 KCNH6Q9H252 994 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 LINC00597Q9H2U6 94 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 CLSTN2Q9H4D0 955 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 EBF3Q9H4W6 596 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 CYP3A43Q9HB55 503 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 RBM12Q9NTZ6 932 aaKnown RBP10.38□□□□□ -0.75
HDAC7-229ENST00000549883 TDP1Q9NUW8 608 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 OBP2AQ9NY56 170 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 UXTQ9UBK9 157 aaPredicted RBP10.38□□□□□ -0.75
HDAC7-229ENST00000549883 COQ4Q9Y3A0 265 aa10.38□□□□□ -0.75
HDAC7-229ENST00000549883 TRAV19A0A0A6YYK7 116 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 CKMP06732 381 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms