RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 PLEKHA7Q6IQ23 1121 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 PDE12Q6L8Q7 609 aaKnown RBP18.34■□□□□ 0.53
LETMD1-220ENST00000549686 TDHQ8IZJ6 230 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 TRIM58Q8NG06 486 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 SLC35G2Q8TBE7 412 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 C8orf48Q96LL4 319 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 ALS2CR12Q96Q35 445 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 SMOQ99835 787 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 C17orf80Q9BSJ5 609 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 LRRC4Q9HBW1 653 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 NGRNQ9NPE2 291 aaKnown RBP18.34■□□□□ 0.53
LETMD1-220ENST00000549686 ABI2Q9NYB9 513 aaPredicted RBP18.34■□□□□ 0.53
LETMD1-220ENST00000549686 CTTNBP2NLQ9P2B4 639 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 AFF4Q9UHB7 1163 aaKnown RBP18.34■□□□□ 0.53
LETMD1-220ENST00000549686 MACROD2A1Z1Q3 448 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 MTMR11A4FU01 709 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 C2CD2LO14523 706 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 SART1O43290 800 aaKnown RBP18.33■□□□□ 0.52
LETMD1-220ENST00000549686 LPXNO60711 386 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 FBXO21O94952 628 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 C1RP00736 705 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 ERBB2P04626 1255 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 MYOGP15173 224 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 OR1D2P34982 312 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 NOP2P46087 812 aaKnown RBP18.33■□□□□ 0.52
LETMD1-220ENST00000549686 TUFMP49411 452 aaKnown RBP18.33■□□□□ 0.52
LETMD1-220ENST00000549686 NAP1L1P55209 391 aaKnown RBP18.33■□□□□ 0.52
LETMD1-220ENST00000549686 ARPP19P56211 112 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 RPL10AP62906 217 aaKnown RBP18.33■□□□□ 0.52
LETMD1-220ENST00000549686 ROR1Q01973 937 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 SMC1AQ14683 1233 aaKnown RBP18.33■□□□□ 0.52
LETMD1-220ENST00000549686 DNAJC24Q6P3W2 148 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 RSPO2Q6UXX9 243 aaPredicted RBP18.33■□□□□ 0.52
LETMD1-220ENST00000549686 NYAP1Q6ZVC0 841 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 TMC7Q7Z402 723 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 XYLT1Q86Y38 959 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 ZNF461Q8TAF7 563 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 SPPL3Q8TCT6 385 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 ARHGEF26Q96DR7 871 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 MCRS1Q96EZ8 462 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 CLSTN3Q9BQT9 956 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 EMILIN2Q9BXX0 1053 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 TRIM10Q9UDY6 481 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 TFR2Q9UP52 801 aa18.33■□□□□ 0.52
LETMD1-220ENST00000549686 A0A0U1RQJ8 604 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 E5RJQ4 531 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 ABLIM3O94929 683 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 GRIK1P39086 918 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 RGS7P49802 495 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 MAMLD1Q13495 774 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 RAB41Q5JT25 222 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 DNAAF5Q86Y56 855 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 SYCE1Q8N0S2 351 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 SIX6OS1Q8N1H7 587 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 SCML4Q8N228 414 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 ZMIZ2Q8NF64 920 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 ZNF564Q8TBZ8 553 aaPredicted RBP18.32■□□□□ 0.52
LETMD1-220ENST00000549686 POF1BQ8WVV4 589 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 ATRIPQ8WXE1 791 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 TCF25Q9BQ70 676 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 SELENOOQ9BVL4 669 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 NUP85Q9BW27 656 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 PBX4Q9BYU1 374 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 CNGB3Q9NQW8 809 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 ENTPD7Q9NQZ7 604 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 TLR9Q9NR96 1032 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 YBX2Q9Y2T7 364 aaKnown RBP18.32■□□□□ 0.52
LETMD1-220ENST00000549686 DUSP10Q9Y6W6 482 aa18.32■□□□□ 0.52
LETMD1-220ENST00000549686 VWA8A3KMH1 1905 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 TCRBV5S1A1TA0A578 114 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 WDR27A2RRH5 827 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 SIGLEC16A6NMB1 481 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 TULP2O00295 520 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 CXCL14O95715 111 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 ADH1AP07327 375 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 HAPLN1P10915 354 aaPredicted RBP18.31■□□□□ 0.52
LETMD1-220ENST00000549686 ATF2P15336 505 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 CYP2F1P24903 491 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 DNAJB2P25686 324 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 CYP4A22Q5TCH4 519 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 OR6B2Q6IFH4 312 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 RNF19BQ6ZMZ0 732 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 ARCQ7LC44 396 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 FEZF2Q8TBJ5 459 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 LMAN2LQ9H0V9 348 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 ASNSD1Q9NWL6 643 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 COMMD8Q9NX08 183 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 PAXBP1Q9Y5B6 917 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 PCDHGC5Q9Y5F6 944 aa18.31■□□□□ 0.52
LETMD1-220ENST00000549686 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.3■□□□□ 0.52
LETMD1-220ENST00000549686 HHLA1C9JL84 531 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 F8VP50 259 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 H3BNC9 293 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 ATMINO43313 823 aaPredicted RBP18.3■□□□□ 0.52
LETMD1-220ENST00000549686 BEST1O76090 585 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 GLI1P08151 1106 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 KRT3P12035 628 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 GNG11P61952 73 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 ETF1P62495 437 aaKnown RBP18.3■□□□□ 0.52
LETMD1-220ENST00000549686 SMAD3P84022 425 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms