RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 DTX3Q8N9I9 347 aa4.28□□□□□ -1.72
APAF1-208ENST00000549007 SMARCC2Q8TAQ2 1214 aa4.28□□□□□ -1.72
APAF1-208ENST00000549007 BTBD2Q9BX70 525 aa4.28□□□□□ -1.72
APAF1-208ENST00000549007 GLIS2Q9BZE0 524 aaPredicted RBP4.28□□□□□ -1.72
APAF1-208ENST00000549007 SENP6Q9GZR1 1112 aaPredicted RBP4.28□□□□□ -1.72
APAF1-208ENST00000549007 KIAA1683Q9H0B3 1180 aa4.28□□□□□ -1.72
APAF1-208ENST00000549007 USP40Q9NVE5 1235 aa4.28□□□□□ -1.72
APAF1-208ENST00000549007 HDAC9Q9UKV0 1011 aa4.28□□□□□ -1.72
APAF1-208ENST00000549007 MROH7-TTC4A0A0A0MT08 1334 aa4.28□□□□□ -1.72
APAF1-208ENST00000549007 RPTORQ8N122 1335 aa4.28□□□□□ -1.72
APAF1-208ENST00000549007 MYO3BQ8WXR4 1341 aa4.28□□□□□ -1.72
APAF1-208ENST00000549007 SALL1Q9NSC2 1324 aa4.28□□□□□ -1.72
APAF1-208ENST00000549007 A0A1W2PPC4 97 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 A0A1W2PR48 441 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 RNF113AO15541 343 aaKnown RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 GPR32O75388 356 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 CSTBP04080 98 aaKnown RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 GAAP10253 952 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 PTPN7P35236 360 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 ADD2P35612 726 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 ALDH9A1P49189 494 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 CPSF6Q16630 551 aaKnown RBP eCLIP4.27□□□□□ -1.73
APAF1-208ENST00000549007 ZNF589Q86UQ0 364 aaPredicted RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 MAPKAPK5Q8IW41 473 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 ADGRG2Q8IZP9 1017 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 CNTROBQ8N137 903 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 LILRA3Q8N6C8 439 aaPredicted RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 STYXQ8WUJ0 223 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 SDR42E1Q8WUS8 393 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 ARL8AQ96BM9 186 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 WDR92Q96MX6 357 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 UNKQ9C0B0 810 aaKnown RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 DDX4Q9NQI0 724 aaKnown RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 ADARB2Q9NS39 739 aaKnown RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 RPS6KL1Q9Y6S9 549 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 MAST3O60307 1309 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 PDS5AQ29RF7 1337 aaKnown RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 CYP2D7A0A087X1C5 515 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 F2RL2O00254 374 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 IPO5O00410 1097 aaKnown RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 ITGA10O75578 1167 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 FURINP09958 794 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 SREBF1P36956 1147 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 KCNJ5P48544 419 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 ITGA1P56199 1179 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 BTKQ06187 659 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 SLC13A2Q13183 592 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 KRT72Q14CN4 511 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 DGKKQ5KSL6 1271 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 VPS53Q5VIR6 699 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 UNC13DQ70J99 1090 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 PDZD4Q76G19 769 aaPredicted RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 BMP8AQ7Z5Y6 402 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 TEX11Q8IYF3 940 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 ABHD4Q8TB40 342 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 TMEM39BQ9GZU3 492 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 BTBD1Q9H0C5 482 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 SEMA6BQ9H3T3 888 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 DIAPH3Q9NSV4 1193 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 MRPS18AQ9NVS2 196 aaKnown RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 ZNF70Q9UC06 446 aaPredicted RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 SLC45A2Q9UMX9 530 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 PSME4Q14997 1843 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 FFAR2O15552 330 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 CYP2D6P10635 497 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 JUPP14923 745 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 EEF1GP26641 437 aaKnown RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 NOMO3P69849 1222 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 BLMHQ13867 455 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 SLC23A3Q6PIS1 610 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 MISP3Q96FF7 219 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 TSPAN17Q96FV3 270 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 GORASP1Q9BQQ3 440 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.27□□□□□ -1.732e-6■■■■□ 25.5
APAF1-208ENST00000549007 CNTD2Q9H8S5 307 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 SARS2Q9NP81 518 aaKnown RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 TRPS1Q9UHF7 1281 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 ANAPC4Q9UJX5 808 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 SLC39A10Q9ULF5 831 aa4.27□□□□□ -1.73
APAF1-208ENST00000549007 ANGEL1Q9UNK9 670 aaKnown RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 RBM8AQ9Y5S9 174 aaKnown RBP4.27□□□□□ -1.73
APAF1-208ENST00000549007 GAKO14976 1311 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 MYH2Q9UKX2 1941 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 PODXLO00592 558 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 ADAMTS3O15072 1205 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 GPAA1O43292 621 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 MYL4P12829 197 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 AFMP43652 599 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 GSK3AP49840 483 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 NRG3P56975 720 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 FKBP1AP62942 108 aaKnown RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 HTRA4P83105 476 aaPredicted RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 MOB2Q70IA6 237 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 INTS4Q96HW7 963 aaKnown RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 ZBED3Q96IU2 234 aaPredicted RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 UBXN10Q96LJ8 280 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 NOX5Q96PH1 765 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 HEPHQ9BQS7 1158 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 RIOK1Q9BRS2 568 aaKnown RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 MRPL46Q9H2W6 279 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms