RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 ATP6V0A4Q9HBG4 840 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 NRIP3Q9NQ35 241 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 STAP2Q9UGK3 403 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 CPA4Q9UI42 421 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 E2F8A0AVK6 867 aa5.04□□□□□ -1.6
CCDC38-206ENST00000548771 POC1B-GALNT4F8VUJ3 575 aa5.04□□□□□ -1.6
CCDC38-206ENST00000548771 RFPL1O75677 317 aa5.04□□□□□ -1.6
CCDC38-206ENST00000548771 PDE8BO95263 885 aa5.04□□□□□ -1.6
CCDC38-206ENST00000548771 PRKCBP05771 671 aa5.04□□□□□ -1.6
CCDC38-206ENST00000548771 DEPDC1Q5TB30 811 aa5.04□□□□□ -1.6
CCDC38-206ENST00000548771 SLC15A3Q8IY34 581 aa5.04□□□□□ -1.6
CCDC38-206ENST00000548771 IZUMO1Q8IYV9 350 aa5.04□□□□□ -1.6
CCDC38-206ENST00000548771 GALNT4Q8N4A0 578 aa5.04□□□□□ -1.6
CCDC38-206ENST00000548771 SLC15A4Q8N697 577 aa5.04□□□□□ -1.6
CCDC38-206ENST00000548771 TERB1Q8NA31 727 aa5.04□□□□□ -1.6
CCDC38-206ENST00000548771 PPP1R35Q8TAP8 253 aa5.04□□□□□ -1.6
CCDC38-206ENST00000548771 OSCP1Q8WVF1 389 aa5.04□□□□□ -1.6
CCDC38-206ENST00000548771 ZMAT3Q9HA38 289 aaKnown RBP5.04□□□□□ -1.6
CCDC38-206ENST00000548771 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.04□□□□□ -1.6
CCDC38-206ENST00000548771 SNX14Q9Y5W7 946 aa5.04□□□□□ -1.6
CCDC38-206ENST00000548771 BTN3A1O00481 513 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 BCAR3O75815 825 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 PDGFRBP09619 1106 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 DLDP09622 509 aaKnown RBP5.03□□□□□ -1.6
CCDC38-206ENST00000548771 CYP2A6P11509 494 aaPredicted RBP5.03□□□□□ -1.6
CCDC38-206ENST00000548771 RAB27AP51159 221 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 TPTEP56180 551 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 GTF2H3Q13889 308 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 MGAT5BQ3V5L5 792 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 SLC9A4Q6AI14 798 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 EPM2AIP1Q7L775 607 aaPredicted RBP5.03□□□□□ -1.6
CCDC38-206ENST00000548771 COL23A1Q86Y22 540 aaPredicted RBP5.03□□□□□ -1.6
CCDC38-206ENST00000548771 PNLDC1Q8NA58 520 aaKnown RBP5.03□□□□□ -1.6
CCDC38-206ENST00000548771 ZNF398Q8TD17 642 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 JPH3Q8WXH2 748 aaPredicted RBP5.03□□□□□ -1.6
CCDC38-206ENST00000548771 MAML1Q92585 1016 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 DAZAP1Q96EP5 407 aaKnown RBP5.03□□□□□ -1.6
CCDC38-206ENST00000548771 C5orf34Q96MH7 638 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 FCRL4Q96PJ5 515 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 TMEM79Q9BSE2 394 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 CDH19Q9H159 772 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 NMRK2Q9NPI5 230 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 XPNPEP3Q9NQH7 507 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 ASIC5Q9NY37 505 aa5.03□□□□□ -1.6
CCDC38-206ENST00000548771 DDX56Q9NY93 547 aaKnown RBP5.03□□□□□ -1.6
CCDC38-206ENST00000548771 IKBKBO14920 756 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 TUSC2O75896 110 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 MYCLP12524 364 aaPredicted RBP5.02□□□□□ -1.61
CCDC38-206ENST00000548771 HSPA6P17066 643 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 IBSPP21815 317 aaPredicted RBP5.02□□□□□ -1.61
CCDC38-206ENST00000548771 GPSM2P81274 684 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 ANO6Q4KMQ2 910 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 LMBRD2Q68DH5 695 aaPredicted RBP5.02□□□□□ -1.61
CCDC38-206ENST00000548771 SLC2A7Q6PXP3 512 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 OVCH2Q7RTZ1 564 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 CAND1Q86VP6 1230 aaKnown RBP5.02□□□□□ -1.61
CCDC38-206ENST00000548771 TPH2Q8IWU9 490 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 IL31RAQ8NI17 732 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 ZBTB9Q96C00 473 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 CTHRC1Q96CG8 243 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 PRR25Q96S07 402 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 SPRTNQ9H040 489 aaPredicted RBP5.02□□□□□ -1.61
CCDC38-206ENST00000548771 ANLNQ9NQW6 1124 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 PDGFCQ9NRA1 345 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 CNNM1Q9NRU3 951 aa5.02□□□□□ -1.61
CCDC38-206ENST00000548771 WDR17Q8IZU2 1322 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 ZNF521Q96K83 1311 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 TMEM233B4DJY2 109 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 E5RJQ4 531 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 MYO1CO00159 1063 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 FCHO1O14526 889 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 PPEF2O14830 753 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 VNN1O95497 513 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 CHRM5P08912 532 aaPredicted RBP5.01□□□□□ -1.61
CCDC38-206ENST00000548771 EN2P19622 333 aaPredicted RBP5.01□□□□□ -1.61
CCDC38-206ENST00000548771 RENBPP51606 427 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 PSG6Q00889 435 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 E2F1Q01094 437 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 PTCHD3Q3KNS1 767 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 PLA1AQ53H76 456 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 L1TD1Q5T7N2 865 aaKnown RBP5.01□□□□□ -1.61
CCDC38-206ENST00000548771 MEX3CQ5U5Q3 659 aaKnown RBP5.01□□□□□ -1.61
CCDC38-206ENST00000548771 ZNF783Q6ZMS7 281 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 BCDIN3DQ7Z5W3 292 aaKnown RBP5.01□□□□□ -1.61
CCDC38-206ENST00000548771 DAAM2Q86T65 1068 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 KRT73Q86Y46 540 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 OR6B3Q8NGW1 331 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 DENND1AQ8TEH3 1009 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 WASF1Q92558 559 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 ZNF180Q9UJW8 692 aa5.01□□□□□ -1.61
CCDC38-206ENST00000548771 FGAP02671 866 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 IGKV2-30P06310 120 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 KITP10721 976 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 FPR3P25089 353 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 NR4A2P43354 598 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 SATB1Q01826 763 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 KRT17Q04695 432 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 TRIP6Q15654 476 aaKnown RBP5□□□□□ -1.61
CCDC38-206ENST00000548771 SWSAP1Q6NVH7 229 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 NPNTQ6UXI9 565 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms