RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 SYNCQ9H7C4 482 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 DMAP1Q9NPF5 467 aaPredicted RBP30.38■■■□□ 2.45
BRF1-213ENST00000548421 CYLDQ9NQC7 956 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 KRT86O43790 486 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 CXCL14O95715 111 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 CYP2F1P24903 491 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 NDUFV1P49821 464 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 SNX16P57768 344 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 ERVFC1P60507 584 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 LIN9Q5TKA1 542 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 VSTM1Q6UX27 236 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 HSFY1Q96LI6 401 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 MIS12Q9H081 205 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 SLC28A3Q9HAS3 691 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 LZTFL1Q9NQ48 299 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 TMEM30AQ9NV96 361 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 STRIP2Q9ULQ0 834 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 IRAK3Q9Y616 596 aa30.37■■■□□ 2.45
BRF1-213ENST00000548421 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP30.36■■■□□ 2.45
BRF1-213ENST00000548421 H3BNC9 293 aa30.36■■■□□ 2.45
BRF1-213ENST00000548421 DNAJB1P25685 340 aa30.36■■■□□ 2.45
BRF1-213ENST00000548421 ARHGAP25P42331 645 aa30.36■■■□□ 2.45
BRF1-213ENST00000548421 MAGEA11P43364 429 aa30.36■■■□□ 2.45
BRF1-213ENST00000548421 GABRB2P47870 512 aa30.36■■■□□ 2.45
BRF1-213ENST00000548421 RGS7P49802 495 aa30.36■■■□□ 2.45
BRF1-213ENST00000548421 RAB33AQ14088 237 aa30.36■■■□□ 2.45
BRF1-213ENST00000548421 SMC1AQ14683 1233 aaKnown RBP30.36■■■□□ 2.45
BRF1-213ENST00000548421 C2CD6Q53TS8 623 aa30.36■■■□□ 2.45
BRF1-213ENST00000548421 TPGS2Q68CL5 300 aa30.36■■■□□ 2.45
BRF1-213ENST00000548421 PIGZQ86VD9 579 aa30.36■■■□□ 2.45
BRF1-213ENST00000548421 ATAD1Q8NBU5 361 aa30.36■■■□□ 2.45
BRF1-213ENST00000548421 ZMIZ2Q8NF64 920 aa30.36■■■□□ 2.45
BRF1-213ENST00000548421 C18orf8Q96DM3 657 aa30.36■■■□□ 2.45
BRF1-213ENST00000548421 UBXN6Q9BZV1 441 aa30.36■■■□□ 2.45
BRF1-213ENST00000548421 NCANO14594 1321 aa30.35■■■□□ 2.45
BRF1-213ENST00000548421 GRM6O15303 877 aa30.35■■■□□ 2.45
BRF1-213ENST00000548421 ACADSBP45954 432 aa30.35■■■□□ 2.45
BRF1-213ENST00000548421 RPL34P49207 117 aaKnown RBP30.35■■■□□ 2.45
BRF1-213ENST00000548421 SMAD3P84022 425 aaKnown RBP30.35■■■□□ 2.45
BRF1-213ENST00000548421 GPM6BQ13491 265 aa30.35■■■□□ 2.45
BRF1-213ENST00000548421 ZNF461Q8TAF7 563 aa30.35■■■□□ 2.45
BRF1-213ENST00000548421 KCTD13Q8WZ19 329 aa30.35■■■□□ 2.45
BRF1-213ENST00000548421 KCNK16Q96T55 309 aa30.35■■■□□ 2.45
BRF1-213ENST00000548421 NGRNQ9NPE2 291 aaKnown RBP30.35■■■□□ 2.45
BRF1-213ENST00000548421 CNOT8Q9UFF9 292 aaKnown RBP30.35■■■□□ 2.45
BRF1-213ENST00000548421 AFF4Q9UHB7 1163 aaKnown RBP30.35■■■□□ 2.45
BRF1-213ENST00000548421 BTNL10A8MVZ5 291 aa30.34■■■□□ 2.45
BRF1-213ENST00000548421 E5RJQ4 531 aa30.34■■■□□ 2.45
BRF1-213ENST00000548421 TEX28O15482 410 aa30.34■■■□□ 2.45
BRF1-213ENST00000548421 ABLIM3O94929 683 aa30.34■■■□□ 2.45
BRF1-213ENST00000548421 VNN2O95498 520 aa30.34■■■□□ 2.45
BRF1-213ENST00000548421 ERBB2P04626 1255 aa30.34■■■□□ 2.45
BRF1-213ENST00000548421 RRM1P23921 792 aa30.34■■■□□ 2.45
BRF1-213ENST00000548421 GRIK1P39086 918 aa30.34■■■□□ 2.45
BRF1-213ENST00000548421 PLPP4Q5VZY2 271 aa30.34■■■□□ 2.45
BRF1-213ENST00000548421 TMEM110Q86TL2 294 aa30.34■■■□□ 2.45
BRF1-213ENST00000548421 ARHGEF26Q96DR7 871 aa30.34■■■□□ 2.45
BRF1-213ENST00000548421 PNPLA8Q9NP80 782 aa30.34■■■□□ 2.45
BRF1-213ENST00000548421 AVENQ9NQS1 362 aaPredicted RBP30.34■■■□□ 2.45
BRF1-213ENST00000548421 TJP2Q9UDY2 1190 aa30.34■■■□□ 2.45
BRF1-213ENST00000548421 TRIM10Q9UDY6 481 aa30.34■■■□□ 2.45
BRF1-213ENST00000548421 FSCN2O14926 492 aa30.33■■■□□ 2.45
BRF1-213ENST00000548421 TRIM66O15016 1216 aa30.33■■■□□ 2.45
BRF1-213ENST00000548421 ATMINO43313 823 aaPredicted RBP30.33■■■□□ 2.45
BRF1-213ENST00000548421 CYP1A2P05177 515 aa30.33■■■□□ 2.45
BRF1-213ENST00000548421 CNPP09543 421 aaKnown RBP30.33■■■□□ 2.45
BRF1-213ENST00000548421 ADCY1Q08828 1119 aa30.33■■■□□ 2.45
BRF1-213ENST00000548421 CYP4A22Q5TCH4 519 aa30.33■■■□□ 2.45
BRF1-213ENST00000548421 RFFLQ8WZ73 363 aa30.33■■■□□ 2.45
BRF1-213ENST00000548421 EMILIN2Q9BXX0 1053 aa30.33■■■□□ 2.45
BRF1-213ENST00000548421 CERS4Q9HA82 394 aa30.33■■■□□ 2.45
BRF1-213ENST00000548421 WDR35Q9P2L0 1181 aa30.33■■■□□ 2.45
BRF1-213ENST00000548421 MYO1AQ9UBC5 1043 aa30.33■■■□□ 2.45
BRF1-213ENST00000548421 DUSP10Q9Y6W6 482 aa30.33■■■□□ 2.45
BRF1-213ENST00000548421 A0A0A6YYK5 440 aaPredicted RBP30.32■■■□□ 2.44
BRF1-213ENST00000548421 F8VP50 259 aa30.32■■■□□ 2.44
BRF1-213ENST00000548421 ABL1P00519 1130 aa30.32■■■□□ 2.44
BRF1-213ENST00000548421 GSCP56915 257 aaPredicted RBP30.32■■■□□ 2.44
BRF1-213ENST00000548421 SCN4BQ8IWT1 228 aa30.32■■■□□ 2.44
BRF1-213ENST00000548421 MRPL43Q8N983 215 aaKnown RBP30.32■■■□□ 2.44
BRF1-213ENST00000548421 TIFAQ96CG3 184 aa30.32■■■□□ 2.44
BRF1-213ENST00000548421 HSFX1Q9UBD0 423 aa30.32■■■□□ 2.44
BRF1-213ENST00000548421 GUCA1BQ9UMX6 200 aa30.32■■■□□ 2.44
BRF1-213ENST00000548421 C2orf71A6NGG8 1288 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 LPXNO60711 386 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 ATF2P15336 505 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 DUSP4Q13115 394 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 CAMK1Q14012 370 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 XYLT1Q86Y38 959 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 RHOT2Q8IXI1 618 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 ARNTL2Q8WYA1 636 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 C8orf48Q96LL4 319 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 LRRC4Q9HBW1 653 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 ESPNB1AK53 854 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 HHLA1C9JL84 531 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 PIK3R2O00459 728 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 CSPG5O95196 566 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 ADH1AP07327 375 aa30.31■■■□□ 2.44
BRF1-213ENST00000548421 HAPLN1P10915 354 aaPredicted RBP30.31■■■□□ 2.44
BRF1-213ENST00000548421 ZNF268Q14587 947 aaPredicted RBP30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms