RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 ACTL7BQ9Y614 415 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 ESRRBO95718 433 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 CLPTM1O96005 669 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 PDGFRBP09619 1106 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 CASP5P51878 434 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 SLC45A4Q5BKX6 768 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 BTBD8Q5XKL5 378 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 TTC33Q6PID6 262 aaPredicted RBP12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 LAYNQ6UX15 382 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 CLEC4FQ8N1N0 589 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 ATPAF2Q8N5M1 289 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 TNFRSF25Q93038 417 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 PRMT7Q9NVM4 692 aaPredicted RBP12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 GID8Q9NWU2 228 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 ZNF229Q9UJW7 825 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 RALBP11234 206 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 ALADP13716 330 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 SSTR1P30872 391 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 ELK3P41970 407 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 NAMPTP43490 491 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 SERPINB8P50452 374 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 BMPR2Q13873 1038 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 KBTBD12Q3ZCT8 623 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 DENND5BQ6ZUT9 1274 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 APOBEC3FQ8IUX4 373 aaKnown RBP12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 PRELID2Q8N945 189 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 PDCD6IPQ8WUM4 868 aaKnown RBP12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 CNDP1Q96KN2 507 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 RHBDL2Q9NX52 303 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 ANKRD26Q9UPS8 1709 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 H0Y626 953 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 RBAK-RBAKDNI3L0D1 243 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 TRIM16O95361 564 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 PSMC3P17980 439 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 FUT2Q10981 343 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 NAPEPLDQ6IQ20 393 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 OTOP1Q7RTM1 612 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 CALML6Q8TD86 181 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 EGFL8Q99944 293 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 POLLQ9UGP5 575 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 MAP3K6O95382 1288 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 ITGB3P05106 788 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 TGM2P21980 687 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 ADRA1DP25100 572 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 SHMT1P34896 483 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 CDK16Q00536 496 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 LRRC71Q8N4P6 559 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 ETNPPLQ8TBG4 499 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 USP18Q9UMW8 372 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 MYL3P08590 195 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 CYP2C8P10632 490 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 NEK2P51955 445 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 KCNA1Q09470 495 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 AASDHQ4L235 1098 aaPredicted RBP12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 MFSD7Q6UXD7 560 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 ART4Q93070 314 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 NMD3Q96D46 503 aaKnown RBP12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 ZDHHC15Q96MV8 337 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 ZNF212Q9UDV6 495 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 DNPEPQ9ULA0 475 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 SOX13Q9UN79 622 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 KCNA4P22459 653 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 RXRBP28702 533 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 RARRES1P49788 294 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 RPL10AP62906 217 aaKnown RBP12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 DCAF6Q58WW2 860 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 PDPK2PQ6A1A2 396 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 C3orf67Q6ZVT6 689 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 SNX19Q92543 992 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 HAS1Q92839 578 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 CNPY3Q9BT09 278 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 CISHQ9NSE2 258 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 MAP3K20Q9NYL2 800 aaKnown RBP12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 PIM2Q9P1W9 311 aa12.67□□□□□ -0.38
NPC1L1-204ENST00000546276 ASB14A6NK59 587 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 IL1R1P14778 569 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 ZNF235Q14590 738 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 IRF2BP2Q7Z5L9 587 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 C4orf32Q8N8J7 132 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 ZNF280CQ8ND82 737 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 EPS8L1Q8TE68 723 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 PPP1R2P1Q96PQ5 205 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 C19orf81C9J6K1 198 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 MAGEB2O15479 319 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 TIMM44O43615 452 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 TBC1D4O60343 1298 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 TLR2O60603 784 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 APOA1P02647 267 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 VDRP11473 427 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 MMP13P45452 471 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 TBL3Q12788 808 aaKnown RBP12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 FOXD4Q12950 439 aaPredicted RBP12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 ADCK1Q86TW2 530 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 SLC25A41Q8N5S1 370 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 SNRNP27Q8WVK2 155 aaKnown RBP12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 ATG4CQ96DT6 458 aa12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 SRPK1Q96SB4 655 aaKnown RBP12.66□□□□□ -0.38
NPC1L1-204ENST00000546276 MMADHCQ9H3L0 296 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms