RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 CITED4Q96RK1 184 aa10.77□□□□□ -0.68
SOD2-216ENST00000546260 RPAP3Q9H6T3 665 aaPredicted RBP10.77□□□□□ -0.68
SOD2-216ENST00000546260 POLR1BQ9H9Y6 1135 aa10.77□□□□□ -0.68
SOD2-216ENST00000546260 KCNK4Q9NYG8 393 aa10.77□□□□□ -0.68
SOD2-216ENST00000546260 LGALS13Q9UHV8 139 aa10.77□□□□□ -0.68
SOD2-216ENST00000546260 CCRL2O00421 344 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 PRPF4O43172 522 aaKnown RBP eCLIP10.77□□□□□ -0.69
SOD2-216ENST00000546260 SORBS3O60504 671 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 RBP3P10745 1247 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 IFNA8P32881 189 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 BST1Q10588 318 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 EFTUD2Q15029 972 aaKnown RBP eCLIP10.77□□□□□ -0.694e-7■□□□□ 11
SOD2-216ENST00000546260 USP17L2Q6R6M4 530 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 ZNF410Q86VK4 478 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 FAM178BQ8IXR5 827 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 TMIGD2Q96BF3 282 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 MXD3Q9BW11 206 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 PARVGQ9HBI0 331 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 VTA1Q9NP79 307 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 SLC24A2Q9UI40 661 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 ZFYVE16Q7Z3T8 1539 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 FRMPD1Q5SYB0 1578 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 SYCE1LA8MT33 242 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 IDH3BO43837 385 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 AKAP3O75969 853 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 WEE2P0C1S8 567 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 PRKCIP41743 596 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 POU5F1Q01860 360 aaKnown RBP10.77□□□□□ -0.69
SOD2-216ENST00000546260 DCAF6Q58WW2 860 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 FRA10AC1Q70Z53 315 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 SLFN11Q7Z7L1 901 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 ADCK1Q86TW2 530 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 MYO1HQ8N1T3 1032 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.77□□□□□ -0.69
SOD2-216ENST00000546260 PTCD3Q96EY7 689 aaKnown RBP10.77□□□□□ -0.69
SOD2-216ENST00000546260 ADNPQ9H2P0 1102 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 SH3GLB2Q9NR46 395 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 SPO11Q9Y5K1 396 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 MYH15Q9Y2K3 1946 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 SLC26A4O43511 780 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 DCXO43602 365 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 GAS7O60861 476 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 MYO1DO94832 1006 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 BMP3P12645 472 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 STMN1P16949 149 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 RCVRNP35243 200 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 SEC23AQ15436 765 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 CYP2A13Q16696 494 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 NIPAL1Q6NVV3 410 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 RSBN1LQ6PCB5 846 aaPredicted RBP10.77□□□□□ -0.69
SOD2-216ENST00000546260 ZBTB49Q6ZSB9 765 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 NDUFAF2Q8N183 169 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 DACT3Q96B18 629 aaPredicted RBP10.77□□□□□ -0.69
SOD2-216ENST00000546260 UPF3AQ9H1J1 476 aaKnown RBP10.77□□□□□ -0.69
SOD2-216ENST00000546260 PLEKHA5Q9HAU0 1116 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 BLOC1S4Q9NUP1 217 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 APEX2Q9UBZ4 518 aa10.77□□□□□ -0.69
SOD2-216ENST00000546260 E2F8A0AVK6 867 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 ZBTB39O15060 712 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 FMO5P49326 533 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 PTK6Q13882 451 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 FASTKD3Q14CZ7 662 aaKnown RBP10.76□□□□□ -0.69
SOD2-216ENST00000546260 PLEKHG4Q58EX7 1191 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 C11orf63Q6NUN7 778 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 ATG14Q6ZNE5 492 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 NOP9Q86U38 636 aaKnown RBP10.76□□□□□ -0.69
SOD2-216ENST00000546260 TPH2Q8IWU9 490 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 CCDC33Q8N5R6 958 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 SCFD1Q8WVM8 642 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 FAM163AQ96GL9 167 aaPredicted RBP10.76□□□□□ -0.69
SOD2-216ENST00000546260 DCLK3Q9C098 648 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 BARHL2Q9NY43 387 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 DNAJB4Q9UDY4 337 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 EXOC7Q9UPT5 735 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 N6AMT1Q9Y5N5 214 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 A0A1W2PPW3 197 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 DCAF8L1A6NGE4 600 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 PIK3R2O00459 728 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 BAIAP3O94812 1187 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 CDH2P19022 906 aaPredicted RBP10.76□□□□□ -0.69
SOD2-216ENST00000546260 CDK9P50750 372 aaKnown RBP10.76□□□□□ -0.69
SOD2-216ENST00000546260 RAD23AP54725 363 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 TUBA1BP68363 451 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 TRIM25Q14258 630 aaKnown RBP10.76□□□□□ -0.69
SOD2-216ENST00000546260 ZNF394Q53GI3 561 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 Q6ZNX1 250 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 TUBA1AQ71U36 451 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 KCNK18Q7Z418 384 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 SETD3Q86TU7 594 aaPredicted RBP10.76□□□□□ -0.69
SOD2-216ENST00000546260 AHI1Q8N157 1196 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 FBXO36Q8NEA4 188 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 OTUD5Q96G74 571 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 CDRT15Q96T59 188 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 MTG1Q9BT17 334 aaPredicted RBP10.76□□□□□ -0.69
SOD2-216ENST00000546260 TLE6Q9H808 572 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 PSTPIP2Q9H939 334 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 PSMD13Q9UNM6 376 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 SPEF1Q9Y4P9 236 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 SAC3D1A6NKF1 404 aa10.76□□□□□ -0.69
SOD2-216ENST00000546260 WDR64B1ANS9 1081 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms