RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PRPF6O94906 941 aaKnown RBP8.28□□□□□ -1.08
SNHG1-223ENST00000545440 CYP11A1P05108 521 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 ELF1P32519 619 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 TAF6P49848 677 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 KRT85P78386 507 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 HTR4Q13639 388 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 MYBPC2Q14324 1141 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 GAS6Q14393 721 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 FOXD4L6Q3SYB3 417 aaPredicted RBP8.28□□□□□ -1.08
SNHG1-223ENST00000545440 PABPC1LQ4VXU2 614 aaKnown RBP8.28□□□□□ -1.08
SNHG1-223ENST00000545440 FAM26FQ5R3K3 315 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 OVOS1Q6IE37 1185 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 ARMCX5Q6P1M9 558 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 NXPE4Q6UWF7 544 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 FOXD4L3Q6VB84 417 aaPredicted RBP8.28□□□□□ -1.08
SNHG1-223ENST00000545440 DSTYKQ6XUX3 929 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 UNC13DQ70J99 1090 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 MTSS1LQ765P7 747 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 EPM2AIP1Q7L775 607 aaPredicted RBP8.28□□□□□ -1.08
SNHG1-223ENST00000545440 USP37Q86T82 979 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 GPD1LQ8N335 351 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 TMEM130Q8N3G9 435 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 FGF13Q92913 245 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 FAM122AQ96E09 287 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 SAAL1Q96ER3 474 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 PRRX2Q99811 253 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 CBWD1Q9BRT8 395 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 FAM213AQ9BRX8 229 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 CYP4F11Q9HBI6 524 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 DPP3Q9NY33 737 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 RBAKQ9NYW8 714 aaPredicted RBP8.28□□□□□ -1.08
SNHG1-223ENST00000545440 RCOR1Q9UKL0 485 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 DSEQ9UL01 958 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 ATP6V1DQ9Y5K8 247 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 KIAA1549LQ6ZVL6 1849 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 PIEZO1Q92508 2521 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 J3QW42 95 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 PDE2AO00408 941 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-223ENST00000545440 EIF4EBP3O60516 100 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-223ENST00000545440 RGS9O75916 674 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-223ENST00000545440 SEC24AO95486 1093 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 RHOP08100 348 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 SRFP11831 508 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 TCF3P15923 654 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 PNPLA4P41247 253 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 ARPP19P56211 112 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 SNRPFP62306 86 aaKnown RBP8.27□□□□□ -1.09
SNHG1-223ENST00000545440 NTHL1P78549 312 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 ADCY1Q08828 1119 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 GPR17Q13304 367 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 PLD1Q13393 1074 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 GRM2Q14416 872 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 BMT2Q1RMZ1 405 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 SV2CQ496J9 727 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 CEP135Q66GS9 1140 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 CEP57L1Q8IYX8 460 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 ELMOD1Q8N336 334 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 LEMD2Q8NC56 503 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 GLIS3Q8NEA6 775 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 LEO1Q8WVC0 666 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-223ENST00000545440 PLD4Q96BZ4 506 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 SENP8Q96LD8 212 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 SPATA32Q96LK8 384 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 CNTNAP3BQ96NU0 1288 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 CNTNAP3Q9BZ76 1288 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 HCFC1R1Q9NWW0 138 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 KIAA1522Q9P206 1035 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-223ENST00000545440 DNMT3BQ9UBC3 853 aaKnown RBP8.27□□□□□ -1.09
SNHG1-223ENST00000545440 HSFX1Q9UBD0 423 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 USP25Q9UHP3 1055 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 ITGA11Q9UKX5 1188 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 ZDHHC9Q9Y397 364 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 TIMM13Q9Y5L4 95 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-223ENST00000545440 NUMBLQ9Y6R0 609 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 CACNA1IQ9P0X4 2223 aa8.27□□□□□ -1.09
SNHG1-223ENST00000545440 F5P12259 2224 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 PVALEFA0A1B0GWK0 134 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 VNN2O95498 520 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 PDGFBP01127 241 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-223ENST00000545440 MYL1P05976 194 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 USP17L7P0C7H9 530 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 SLFN14P0C7P3 912 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 PFKFB1P16118 471 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 PTPN2P17706 415 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 AMPD1P23109 780 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 CMA1P23946 247 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 HOXD13P35453 343 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 EPHA5P54756 1037 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 VCPP55072 806 aaKnown RBP8.26□□□□□ -1.09
SNHG1-223ENST00000545440 TFAMQ00059 246 aaKnown RBP8.26□□□□□ -1.09
SNHG1-223ENST00000545440 TWF1Q12792 350 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 SURF1Q15526 300 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 SLC5A9Q2M3M2 681 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 PRSS36Q5K4E3 855 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 CWF19L1Q69YN2 538 aaKnown RBP8.26□□□□□ -1.09
SNHG1-223ENST00000545440 SLCO4C1Q6ZQN7 724 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 HS2ST1Q7LGA3 356 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 SLC44A3Q8N4M1 653 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 GPR161Q8N6U8 529 aaKnown RBP8.26□□□□□ -1.09
SNHG1-223ENST00000545440 LRRC52Q8N7C0 313 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms