RNA–Protein interactions for RNA: ENST00000544401.2

PPME1-209, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 4

Gene PPME1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-209ENST00000544401 HSPBP1Q9NZL4 362 aa11□□□□□ -0.65
PPME1-209ENST00000544401 BCCIPQ9P287 314 aaKnown RBP eCLIP11□□□□□ -0.65
PPME1-209ENST00000544401 SPTBN2O15020 2390 aa11□□□□□ -0.65
PPME1-209ENST00000544401 TICRRQ7Z2Z1 1910 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 FRMD3A2A2Y4 597 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 BCLAF3A2AJT9 711 aaKnown RBP10.99□□□□□ -0.65
PPME1-209ENST00000544401 C2orf78A6NCI8 922 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 LEFTY2O00292 366 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 EIF3DO15371 548 aaKnown RBP eCLIP10.99□□□□□ -0.65
PPME1-209ENST00000544401 TADA3O75528 432 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 KRT37O76014 449 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 RTN3O95197 1032 aaPredicted RBP10.99□□□□□ -0.65
PPME1-209ENST00000544401 KCNK5O95279 499 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 CD2BP2O95400 341 aaKnown RBP10.99□□□□□ -0.65
PPME1-209ENST00000544401 SYT1P21579 422 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 RDXP35241 583 aaKnown RBP10.99□□□□□ -0.65
PPME1-209ENST00000544401 EIF2DP41214 584 aaKnown RBP10.99□□□□□ -0.65
PPME1-209ENST00000544401 NOVA1P51513 510 aaKnown RBP10.99□□□□□ -0.65
PPME1-209ENST00000544401 CASP5P51878 434 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 NOP14P78316 857 aaKnown RBP10.99□□□□□ -0.65
PPME1-209ENST00000544401 SLC7A9P82251 487 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 SHC2P98077 582 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 SLC39A14Q15043 492 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 MDH1BQ5I0G3 518 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 EOGTQ5NDL2 527 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 LPCAT2Q7L5N7 544 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 TRAPPC11Q7Z392 1133 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 TRMT11Q7Z4G4 463 aaKnown RBP10.99□□□□□ -0.65
PPME1-209ENST00000544401 OSTM1Q86WC4 334 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 PGBD3Q8N328 593 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 WHAMMQ8TF30 809 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 SYAP1Q96A49 352 aaPredicted RBP10.99□□□□□ -0.65
PPME1-209ENST00000544401 C8orf48Q96LL4 319 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 PNKPQ96T60 521 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 PKMYT1Q99640 499 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 DNAI2Q9GZS0 605 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 TMEM9BQ9NQ34 198 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 GCNT4Q9P109 453 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 CGNQ9P2M7 1197 aaKnown RBP10.99□□□□□ -0.65
PPME1-209ENST00000544401 SIX4Q9UIU6 781 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 MORC2Q9Y6X9 1032 aaPredicted RBP10.99□□□□□ -0.65
PPME1-209ENST00000544401 ACACBO00763 2458 aa10.99□□□□□ -0.65
PPME1-209ENST00000544401 CACNA1BQ00975 2339 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 DNAH14Q0VDD8 3507 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 ZNF840PA6NDX5 716 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 A8MXQ7 604 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 F8VP50 259 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 ATP2C2O75185 946 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 TACC1O75410 805 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 MBL2P11226 248 aaPredicted RBP10.98□□□□□ -0.65
PPME1-209ENST00000544401 P4HA1P13674 534 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 LMO2P25791 158 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 PMLP29590 882 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 ATICP31939 592 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 DHPSP49366 369 aaPredicted RBP10.98□□□□□ -0.65
PPME1-209ENST00000544401 ATXN3P54252 364 aaPredicted RBP10.98□□□□□ -0.65
PPME1-209ENST00000544401 GOLGA8FQ08AF8 430 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 GOLGA8DPQ0D2H9 430 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 IFRD2Q12894 506 aaPredicted RBP10.98□□□□□ -0.65
PPME1-209ENST00000544401 LMAN2Q12907 356 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 RESTQ13127 1097 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 CUL4AQ13619 759 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 SNRNP35Q16560 246 aaKnown RBP10.98□□□□□ -0.65
PPME1-209ENST00000544401 WDR72Q3MJ13 1102 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 SDE2Q6IQ49 451 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 PSAPL1Q6NUJ1 521 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 FILIP1Q7Z7B0 1213 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 CBWD2Q8IUF1 395 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 NUP93Q8N1F7 819 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 CCDC33Q8N5R6 958 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 XXYLT1Q8NBI6 393 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 RDH13Q8NBN7 331 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 OR5B17Q8NGF7 314 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 GOLGA5Q8TBA6 731 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 USP33Q8TEY7 942 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 CCDC127Q96BQ5 260 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 OTUB2Q96DC9 234 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 PCED1BQ96HM7 432 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 TNIP3Q96KP6 325 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 CNOT6LQ96LI5 555 aaKnown RBP10.98□□□□□ -0.65
PPME1-209ENST00000544401 SLC22A12Q96S37 553 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 MED10Q9BTT4 135 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 NUSAP1Q9BXS6 441 aaKnown RBP10.98□□□□□ -0.65
PPME1-209ENST00000544401 LINC00597Q9H2U6 94 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 SLC32A1Q9H598 525 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 MAGEF1Q9HAY2 307 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 ARHGEF4Q9NR80 690 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 SMPD4Q9NXE4 827 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 CFAP97Q9P2B7 532 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 MMP17Q9ULZ9 603 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 SH3BP1Q9Y3L3 701 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 CPQQ9Y646 472 aa10.98□□□□□ -0.65
PPME1-209ENST00000544401 C4orf47A7E2U8 309 aa10.97□□□□□ -0.65
PPME1-209ENST00000544401 DCLK1O15075 740 aa10.97□□□□□ -0.65
PPME1-209ENST00000544401 SPTLC2O15270 562 aa10.97□□□□□ -0.65
PPME1-209ENST00000544401 PDIA4P13667 645 aaKnown RBP10.97□□□□□ -0.65
PPME1-209ENST00000544401 PTPN1P18031 435 aaKnown RBP10.97□□□□□ -0.65
PPME1-209ENST00000544401 YWHAQP27348 245 aa10.97□□□□□ -0.65
PPME1-209ENST00000544401 GRIA2P42262 883 aa10.97□□□□□ -0.65
PPME1-209ENST00000544401 TNFRSF4P43489 277 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms