RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	TRPC7	Q9HCX4	862 aa		13.43	□□□□□ -0.26
CLPB-213	ENST00000544382	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.43	□□□□□ -0.26
CLPB-213	ENST00000544382	RAB20	Q9NX57	234 aa		13.43	□□□□□ -0.26
CLPB-213	ENST00000544382	TRPM5	Q9NZQ8	1165 aa		13.43	□□□□□ -0.26
CLPB-213	ENST00000544382	KIAA1468	Q9P260	1216 aa		13.43	□□□□□ -0.26
CLPB-213	ENST00000544382	CTNND2	Q9UQB3	1225 aa		13.43	□□□□□ -0.26
CLPB-213	ENST00000544382	NME7	Q9Y5B8	376 aa		13.43	□□□□□ -0.26
CLPB-213	ENST00000544382	WDFY4	Q6ZS81	3184 aa		13.43	□□□□□ -0.26
CLPB-213	ENST00000544382	F5	P12259	2224 aa		13.43	□□□□□ -0.26
CLPB-213	ENST00000544382	CLDN5	O00501	218 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	AP1G2	O75843	785 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	PRAMEF12	O95522	483 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	CKM	P06732	381 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	USP17L7	P0C7H9	530 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	KPNA1	P52294	538 aa	Predicted RBP	13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	ZNF268	Q14587	947 aa	Predicted RBP	13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	TXNDC8	Q6A555	127 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	TMEM150A	Q86TG1	271 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	CCDC105	Q8IYK2	499 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	NUP93	Q8N1F7	819 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	CRYBG2	Q8N1P7	616 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	DTWD2	Q8NBA8	298 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	PDZD8	Q8NEN9	1154 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	ELMO3	Q96BJ8	720 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	GBP4	Q96PP9	640 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	DDX23	Q9BUQ8	820 aa	Known RBP	13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	TTLL2	Q9BWV7	592 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	FOXQ1	Q9C009	403 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	HEBP1	Q9NRV9	189 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	KRT82	Q9NSB4	513 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	TDP1	Q9NUW8	608 aa		13.42	□□□□□ -0.26
CLPB-213	ENST00000544382	CACNA1H	O95180	2353 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	FAM170B	A6NMN3	283 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	PPP1R3G	B7ZBB8	358 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	PI15	O43692	258 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	FAM200B	P0CF97	657 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	CD44	P16070	742 aa	Known RBP	13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	CD58	P19256	250 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	YWHAQ	P27348	245 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	MLLT6	P55198	1093 aa	Predicted RBP	13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	YWHAE	P62258	255 aa	Known RBP	13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	NHLH1	Q02575	133 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	CAMK4	Q16566	473 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	TTI2	Q6NXR4	508 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	GPIHBP1	Q8IV16	184 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	SLC2A14	Q8TDB8	520 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	APOBEC3G	Q9HC16	384 aa	Known RBP	13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	LTB4R2	Q9NPC1	389 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	COMMD8	Q9NX08	183 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	PIAS3	Q9Y6X2	628 aa		13.41	□□□□□ -0.26
CLPB-213	ENST00000544382	GOLGA6L22	H0YM25	854 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	CILP	O75339	1184 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	TADA3	O75528	432 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	ABL1	P00519	1130 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	DCN	P07585	359 aa	Known RBP	13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	CCDC192	P0DO97	292 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	CCDC130	P13994	396 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	BMP6	P22004	513 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	TCF15	Q12870	199 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	IFRD2	Q12894	506 aa	Predicted RBP	13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	ORC1	Q13415	861 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	CBWD6	Q4V339	395 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	CBWD3	Q5JTY5	395 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	CBWD5	Q5RIA9	395 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	FUK	Q8N0W3	1084 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	OVCA2	Q8WZ82	227 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	FAM3C	Q92520	227 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	SEMA4D	Q92854	862 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	ATOH1	Q92858	354 aa	Predicted RBP	13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	USP13	Q92995	863 aa	Predicted RBP	13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	FBXO32	Q969P5	355 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	SLC35C1	Q96A29	364 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	RSPRY1	Q96DX4	576 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	DUSP9	Q99956	384 aa	Known RBP	13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	SMG9	Q9H0W8	520 aa	Known RBP	13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	CLSTN2	Q9H4D0	955 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	FBXO44	Q9H4M3	255 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	FAM49B	Q9NUQ9	324 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	HMGXB4	Q9UGU5	601 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	COQ4	Q9Y3A0	265 aa		13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	HELZ	P42694	1942 aa	Known RBP	13.4	□□□□□ -0.26
CLPB-213	ENST00000544382	NCAN	O14594	1321 aa		13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	ARNTL	O00327	626 aa		13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	P4HA2	O15460	535 aa		13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	HDC	P19113	662 aa		13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	TBXAS1	P24557	533 aa	Predicted RBP	13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	ADORA2B	P29275	332 aa		13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	FMO5	P49326	533 aa		13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	CACNA2D1	P54289	1103 aa		13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	STX17	P56962	302 aa		13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	USP46	P62068	366 aa		13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	AMPD2	Q01433	879 aa		13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	TAF10	Q12962	218 aa		13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	PDGFRL	Q15198	375 aa		13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	CLEC17A	Q6ZS10	378 aa		13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	RALGPS2	Q86X27	583 aa	Predicted RBP	13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.39	□□□□□ -0.27
CLPB-213	ENST00000544382	C12orf29	Q8N999	325 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms