RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 COL4A2P08572 1712 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 IKBKBO14920 756 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 ARSAP15289 507 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 MAGEA9P43362 315 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 GCLMP48507 274 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 VAMP7P51809 220 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 PLCB2Q00722 1185 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 PPP3CAQ08209 521 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 ADAM9Q13443 819 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 PON2Q15165 354 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 NAIF1Q69YI7 327 aaPredicted RBP11.4□□□□□ -0.58
CHEK1-218ENST00000544373 Q6ZS52 159 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 ADSSL1Q8N142 457 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 CCDC47Q96A33 483 aaKnown RBP11.4□□□□□ -0.58
CHEK1-218ENST00000544373 C8orf48Q96LL4 319 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 PHF12Q96QT6 1004 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 THG1LQ9NWX6 298 aaKnown RBP11.4□□□□□ -0.58
CHEK1-218ENST00000544373 ZMYM5Q9UJ78 669 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 FBXO4Q9UKT5 387 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 CEP250Q9BV73 2442 aa11.4□□□□□ -0.58
CHEK1-218ENST00000544373 ZNF840PA6NDX5 716 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 SOBPA7XYQ1 873 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 KIF20AO95235 890 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 ASS1P00966 412 aaKnown RBP11.4□□□□□ -0.59
CHEK1-218ENST00000544373 HLA-DRAP01903 254 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 CKMP06732 381 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 TDGF1P13385 188 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 ANXA13P27216 316 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 ASPAP45381 313 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 NUCB2P80303 420 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 ZNF268Q14587 947 aaPredicted RBP11.4□□□□□ -0.59
CHEK1-218ENST00000544373 NFIL3Q16649 462 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 SGSM1Q2NKQ1 1148 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 ITPRIPL2Q3MIP1 535 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 ZNF528Q3MIS6 628 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 ACOT1Q86TX2 421 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 RALGPS2Q86X27 583 aaPredicted RBP11.4□□□□□ -0.59
CHEK1-218ENST00000544373 FAM186BQ8IYM0 893 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 TAS1R2Q8TE23 839 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 TTLL2Q9BWV7 592 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 RNF38Q9H0F5 515 aa11.4□□□□□ -0.59
CHEK1-218ENST00000544373 APOBEC3GQ9HC16 384 aaKnown RBP11.4□□□□□ -0.59
CHEK1-218ENST00000544373 FBRSL1Q9HCM7 1045 aaKnown RBP11.4□□□□□ -0.59
CHEK1-218ENST00000544373 PRMT8Q9NR22 394 aaPredicted RBP11.4□□□□□ -0.59
CHEK1-218ENST00000544373 DMXL1Q9Y485 3027 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 TICRRQ7Z2Z1 1910 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 DCHS1Q96JQ0 3298 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 TRAV19A0A0A6YYK7 116 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 TRIM66O15016 1216 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 MAPK13O15264 365 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 LMNAP02545 664 aaKnown RBP11.39□□□□□ -0.59
CHEK1-218ENST00000544373 USP17L7P0C7H9 530 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 HDCP19113 662 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 NDST1P52848 882 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 NOP14P78316 857 aaKnown RBP11.39□□□□□ -0.59
CHEK1-218ENST00000544373 SATB1Q01826 763 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 FAM160A1Q05DH4 1040 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 IFRD2Q12894 506 aaPredicted RBP11.39□□□□□ -0.59
CHEK1-218ENST00000544373 TAF10Q12962 218 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 RUNX3Q13761 415 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 MTF1Q14872 753 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 ZNF77Q15935 545 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 FUKQ8N0W3 1084 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 C12orf29Q8N999 325 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 SUMF1Q8NBK3 374 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 SCAMP5Q8TAC9 235 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 NELL1Q92832 810 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 TWNKQ96RR1 684 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 ELOVL4Q9GZR5 314 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 LINC00597Q9H2U6 94 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 MMRN2Q9H8L6 949 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 PCDHA5Q9Y5H7 936 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 WNT6Q9Y6F9 365 aa11.39□□□□□ -0.59
CHEK1-218ENST00000544373 GOLGA6L4A6NEF3 574 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 BEST1O76090 585 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 CCDC130P13994 396 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 PSMC2P35998 433 aaKnown RBP11.38□□□□□ -0.59
CHEK1-218ENST00000544373 PIK3CAP42336 1068 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 PRCPP42785 496 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 PMS1P54277 932 aaKnown RBP11.38□□□□□ -0.59
CHEK1-218ENST00000544373 CCINQ13939 588 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 CC2D1AQ6P1N0 951 aaPredicted RBP11.38□□□□□ -0.59
CHEK1-218ENST00000544373 PKN3Q6P5Z2 889 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 MAMSTRQ6ZN01 415 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 INTS8Q75QN2 995 aaKnown RBP11.38□□□□□ -0.59
CHEK1-218ENST00000544373 FAM35AQ86V20 835 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 ZBTB44Q8NCP5 570 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 SH3RF2Q8TEC5 729 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 MSANTD3Q96H12 275 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 CEP295NLQ96MC4 621 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 MED10Q9BTT4 135 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 KIF9Q9HAQ2 790 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 TRPM5Q9NZQ8 1165 aa11.38□□□□□ -0.59
CHEK1-218ENST00000544373 TNFRSF10BO14763 440 aa11.37□□□□□ -0.59
CHEK1-218ENST00000544373 SCAMP3O14828 347 aaKnown RBP11.37□□□□□ -0.59
CHEK1-218ENST00000544373 ABL1P00519 1130 aa11.37□□□□□ -0.59
CHEK1-218ENST00000544373 RPL13P26373 211 aaKnown RBP11.37□□□□□ -0.59
CHEK1-218ENST00000544373 PGFP49763 221 aa11.37□□□□□ -0.59
CHEK1-218ENST00000544373 MCCD1P59942 119 aaPredicted RBP11.37□□□□□ -0.59
CHEK1-218ENST00000544373 DMWDQ09019 674 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms