RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 NETO2Q8NC67 525 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 NAP1L3Q99457 506 aaPredicted RBP14.39□□□□□ -0.11
HCFC2-202ENST00000544223 SLITRK6Q9H5Y7 841 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 NGRNQ9NPE2 291 aaKnown RBP14.39□□□□□ -0.11
HCFC2-202ENST00000544223 CRTAC1Q9NQ79 661 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 TMPRSS4Q9NRS4 437 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 HESX1Q9UBX0 185 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 STRIP2Q9ULQ0 834 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 UTP11Q9Y3A2 253 aaKnown RBP14.39□□□□□ -0.11
HCFC2-202ENST00000544223 SZT2Q5T011 3432 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 A0A0U1RQF3 1178 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 PSTPIP1O43586 416 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 SYF2O95926 243 aaKnown RBP14.38□□□□□ -0.11
HCFC2-202ENST00000544223 KRT14P02533 472 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 PBX3P40426 434 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 GABRB2P47870 512 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 KLF1Q13351 362 aaPredicted RBP14.38□□□□□ -0.11
HCFC2-202ENST00000544223 DSC3Q14574 896 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 DSTYKQ6XUX3 929 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 KATNAL2Q8IYT4 538 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 UHMK1Q8TAS1 419 aaKnown RBP14.38□□□□□ -0.11
HCFC2-202ENST00000544223 FBXO25Q8TCJ0 367 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 PXYLP1Q8TE99 480 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 ERP44Q9BS26 406 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 FAN1Q9Y2M0 1017 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 SCN5AQ14524 2016 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 MCM3P25205 808 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 MAP3K7CLP57077 242 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 ZNF268Q14587 947 aaPredicted RBP14.38□□□□□ -0.11
HCFC2-202ENST00000544223 UPP1Q16831 310 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 CCDC14Q49A88 953 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 ZC3H12AQ5D1E8 599 aaKnown RBP14.38□□□□□ -0.11
HCFC2-202ENST00000544223 IPO4Q8TEX9 1081 aaKnown RBP14.38□□□□□ -0.11
HCFC2-202ENST00000544223 SCLYQ96I15 445 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 B3GALT6Q96L58 329 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 MED10Q9BTT4 135 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 DNPEPQ9ULA0 475 aa14.38□□□□□ -0.11
HCFC2-202ENST00000544223 PTPN1P18031 435 aaKnown RBP14.37□□□□□ -0.11
HCFC2-202ENST00000544223 LRPAP1P30533 357 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 KRT17Q04695 432 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 MTM1Q13496 603 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 ODF2Q5BJF6 829 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 DUPD1Q68J44 220 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 SPOCD1Q6ZMY3 1216 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 GPRIN1Q7Z2K8 1008 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 PIK3R5Q8WYR1 880 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 CALN1Q9BXU9 219 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.37□□□□□ -0.11
HCFC2-202ENST00000544223 DNAJB4Q9UDY4 337 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 MTUS1Q9ULD2 1270 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 EYSQ5T1H1 3165 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 BPTFQ12830 3046 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 ZNF638Q14966 1978 aaKnown RBP14.37□□□□□ -0.11
HCFC2-202ENST00000544223 C3orf70A6NLC5 250 aaPredicted RBP14.37□□□□□ -0.11
HCFC2-202ENST00000544223 C2CD4BA6NLJ0 364 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 XPOTO43592 962 aaKnown RBP14.37□□□□□ -0.11
HCFC2-202ENST00000544223 DDHD2O94830 711 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 CHRNA3P32297 505 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 ADIGQ0VDE8 80 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 PIGHQ14442 188 aaPredicted RBP14.37□□□□□ -0.11
HCFC2-202ENST00000544223 GPNMBQ14956 572 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 PPP1R7Q15435 360 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 CA9Q16790 459 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 CD300LGQ6UXG3 332 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 NPNTQ6UXI9 565 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 PIGZQ86VD9 579 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 ADAM32Q8TC27 787 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 ZIM3Q96PE6 472 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 UBXN6Q9BZV1 441 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 DCLK3Q9C098 648 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 CHST12Q9NRB3 414 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 VPS18Q9P253 973 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 USP18Q9UMW8 372 aa14.37□□□□□ -0.11
HCFC2-202ENST00000544223 MRPL42Q9Y6G3 142 aaKnown RBP14.37□□□□□ -0.11
HCFC2-202ENST00000544223 FRMPD3Q5JV73 1810 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 NBNO60934 754 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 TUBBP07437 444 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 OR4Q2P0C623 313 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 UAP1Q16222 522 aaPredicted RBP14.36□□□□□ -0.11
HCFC2-202ENST00000544223 CLLU1OSQ5K130 101 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 SYCP2LQ5T4T6 812 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 KCTD16Q68DU8 428 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 ZDHHC24Q6UX98 284 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 HFE2Q6ZVN8 426 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 CYP4V2Q6ZWL3 525 aaPredicted RBP14.36□□□□□ -0.11
HCFC2-202ENST00000544223 ECHDC2Q86YB7 292 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 CRYBG2Q8N1P7 616 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 EXD1Q8NHP7 514 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 PCED1BQ96HM7 432 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 SLC4A5Q9BY07 1137 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.36□□□□□ -0.11
HCFC2-202ENST00000544223 TMLHEQ9NVH6 421 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 GRHL1Q9NZI5 618 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 ATP8A1Q9Y2Q0 1164 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 PRG3Q9Y2Y8 225 aaPredicted RBP14.36□□□□□ -0.11
HCFC2-202ENST00000544223 GOLGA6BA6NDN3 693 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 GPD1P21695 349 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 PNPLA4P41247 253 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 CDKN2BP42772 138 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 CCL23P55773 120 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms