RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 TCRBV9S1A1TA0A576 114 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 ARHGAP42A6NI28 874 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 LYPLA2O95372 231 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 ACO1P21399 889 aaKnown RBP13.09□□□□□ -0.31
SMCR5-201ENST00000543475 ELK3P41970 407 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 AQP5P55064 265 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 YWHAGP61981 247 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMCR5-201ENST00000543475 BST1Q10588 318 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 CUL2Q13617 745 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 PPP1R2P3Q6NXS1 205 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 DNAJC24Q6P3W2 148 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 C15orf39Q6ZRI6 1047 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 FAM196AQ6ZSG2 479 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 TRIM42Q8IWZ5 723 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 SP8Q8IXZ3 490 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 NAT14Q8WUY8 206 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 C7orf26Q96N11 449 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 IDI2Q9BXS1 227 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 CCDC195A0A1B0GUA6 201 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 BUD23O43709 281 aaKnown RBP13.09□□□□□ -0.31
SMCR5-201ENST00000543475 PABPC4LP0CB38 370 aaKnown RBP13.09□□□□□ -0.31
SMCR5-201ENST00000543475 HARSP12081 509 aaKnown RBP13.09□□□□□ -0.31
SMCR5-201ENST00000543475 HOXA10P31260 410 aaPredicted RBP13.09□□□□□ -0.31
SMCR5-201ENST00000543475 ASPHQ12797 758 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 HNRNPDQ14103 355 aaKnown RBP13.09□□□□□ -0.31
SMCR5-201ENST00000543475 MAP7Q14244 749 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 HIC1Q14526 733 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 HSF5Q4G112 596 aaPredicted RBP13.09□□□□□ -0.31
SMCR5-201ENST00000543475 SH2D5Q6ZV89 423 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 DHDDSQ86SQ9 333 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 PDSS2Q86YH6 399 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 IGDCC3Q8IVU1 814 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 GSTCDQ8NEC7 633 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 PYDC1Q8WXC3 89 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 E2F7Q96AV8 911 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 HIC2Q96JB3 615 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 LMCD1Q9NZU5 365 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 PHF24Q9UPV7 400 aa13.09□□□□□ -0.31
SMCR5-201ENST00000543475 A6NJR5 290 aa13.08□□□□□ -0.31
SMCR5-201ENST00000543475 PRR5-ARHGAP8B1AHC4 643 aa13.08□□□□□ -0.31
SMCR5-201ENST00000543475 CST8O60676 142 aa13.08□□□□□ -0.31
SMCR5-201ENST00000543475 TSHRP16473 764 aa13.08□□□□□ -0.31
SMCR5-201ENST00000543475 MMP8P22894 467 aa13.08□□□□□ -0.31
SMCR5-201ENST00000543475 ARHGAP8P85298 464 aa13.08□□□□□ -0.31
SMCR5-201ENST00000543475 TBCCQ15814 346 aa13.08□□□□□ -0.31
SMCR5-201ENST00000543475 ZACNQ401N2 412 aa13.08□□□□□ -0.31
SMCR5-201ENST00000543475 PABPC1LQ4VXU2 614 aaKnown RBP13.08□□□□□ -0.31
SMCR5-201ENST00000543475 TDRD10Q5VZ19 366 aaKnown RBP13.08□□□□□ -0.31
SMCR5-201ENST00000543475 KYAT3Q6YP21 454 aaKnown RBP13.08□□□□□ -0.31
SMCR5-201ENST00000543475 CDHR3Q6ZTQ4 885 aa13.08□□□□□ -0.31
SMCR5-201ENST00000543475 SPATA24Q86W54 205 aa13.08□□□□□ -0.31
SMCR5-201ENST00000543475 FAM172AQ8WUF8 416 aa13.08□□□□□ -0.31
SMCR5-201ENST00000543475 CHURC1Q8WUH1 139 aa13.08□□□□□ -0.31
SMCR5-201ENST00000543475 AGO4Q9HCK5 861 aaKnown RBP13.08□□□□□ -0.31
SMCR5-201ENST00000543475 S100A14Q9HCY8 104 aa13.08□□□□□ -0.31
SMCR5-201ENST00000543475 TBC1D30Q9Y2I9 924 aa13.08□□□□□ -0.31
SMCR5-201ENST00000543475 MEI4A8MW99 385 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 TRIM49D1C9J1S8 452 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 KBTBD13C9JR72 458 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 STIP1P31948 543 aaKnown RBP13.08□□□□□ -0.32
SMCR5-201ENST00000543475 SOX10P56693 466 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 OGDHQ02218 1023 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 MAP3K10Q02779 954 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 PIGHQ14442 188 aaPredicted RBP13.08□□□□□ -0.32
SMCR5-201ENST00000543475 CHI3L2Q15782 390 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 AAGABQ6PD74 315 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 LDHDQ86WU2 507 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 CRLF3Q8IUI8 442 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 CTAGE3PQ8IX95 158 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 C4orf19Q8IY42 314 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 IL31RAQ8NI17 732 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 ACER1Q8TDN7 264 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 BSNDQ8WZ55 320 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 CCDC106Q9BWC9 280 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 ZNF395Q9H8N7 513 aaPredicted RBP13.08□□□□□ -0.32
SMCR5-201ENST00000543475 TMCO1Q9UM00 188 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 SOX13Q9UN79 622 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 LTBP1Q14766 1721 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 CALB1P05937 261 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 SMTNL2Q2TAL5 461 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 TKFCQ3LXA3 575 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 EFHC1Q5JVL4 640 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 TTC39BQ5VTQ0 682 aaPredicted RBP13.08□□□□□ -0.32
SMCR5-201ENST00000543475 ADGRG6Q86SQ4 1221 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 LCA5Q86VQ0 697 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 TTC13Q8NBP0 860 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 C1orf21Q9H246 121 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 SMYD3Q9H7B4 428 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 ZDHHC7Q9NXF8 308 aa13.08□□□□□ -0.32
SMCR5-201ENST00000543475 BTAF1O14981 1849 aa13.07□□□□□ -0.32
SMCR5-201ENST00000543475 MAFGO15525 162 aa13.07□□□□□ -0.32
SMCR5-201ENST00000543475 FAM155BO75949 473 aa13.07□□□□□ -0.32
SMCR5-201ENST00000543475 PENKP01210 267 aaPredicted RBP13.07□□□□□ -0.32
SMCR5-201ENST00000543475 WEE2P0C1S8 567 aa13.07□□□□□ -0.32
SMCR5-201ENST00000543475 SPATA31D3P0C874 917 aa13.07□□□□□ -0.32
SMCR5-201ENST00000543475 UQCRBP14927 111 aa13.07□□□□□ -0.32
SMCR5-201ENST00000543475 GARTP22102 1010 aa13.07□□□□□ -0.32
SMCR5-201ENST00000543475 CCNFP41002 786 aa13.07□□□□□ -0.32
SMCR5-201ENST00000543475 MTMR1Q13613 665 aa13.07□□□□□ -0.32
SMCR5-201ENST00000543475 UBAP2LQ14157 1087 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms