RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PGLYRP2Q96PD5 576 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 TGS1Q96RS0 853 aaKnown RBP11.26□□□□□ -0.61
DDB1-221ENST00000543162 SMOQ99835 787 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 CLSTN3Q9BQT9 956 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 SLC4A5Q9BY07 1137 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 CSNK1G1Q9HCP0 422 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 ABCB6Q9NP58 842 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 ALG13Q9NP73 1137 aaKnown RBP11.26□□□□□ -0.61
DDB1-221ENST00000543162 CYLDQ9NQC7 956 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.26□□□□□ -0.61
DDB1-221ENST00000543162 PARVAQ9NVD7 372 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 CTTNBP2NLQ9P2B4 639 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 WDR35Q9P2L0 1181 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 YBX2Q9Y2T7 364 aaKnown RBP11.26□□□□□ -0.61
DDB1-221ENST00000543162 SCINQ9Y6U3 715 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 MTMR11A4FU01 709 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 E5RJQ4 531 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 GOLGA8SH3BPF8 625 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 PIK3R2O00459 728 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 BUB1O43683 1085 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 MOCS3O95396 460 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 CXCL14O95715 111 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 CYP2F1P24903 491 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 GRIK1P39086 918 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 PBX2P40425 430 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 MAGEA11P43364 429 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 CACNA2D1P54289 1103 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 ERVK-21P61565 698 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 TAP1Q03518 808 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 UBE3AQ05086 875 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 ZNF268Q14587 947 aaPredicted RBP11.25□□□□□ -0.61
DDB1-221ENST00000543162 TCEAL1Q15170 157 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 OR6B2Q6IFH4 312 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 PLEKHA7Q6IQ23 1121 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 LLGL2Q6P1M3 1020 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 DNAJC24Q6P3W2 148 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 VSTM1Q6UX27 236 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 RNF19BQ6ZMZ0 732 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 TMEM110Q86TL2 294 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 XYLT1Q86Y38 959 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 SCN4BQ8IWT1 228 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 TDHQ8IZJ6 230 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 ATAD1Q8NBU5 361 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 ZMIZ2Q8NF64 920 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 SPPL3Q8TCT6 385 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 SPPL2BQ8TCT7 592 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 KCTD13Q8WZ19 329 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 C16orf45Q96MC5 204 aaPredicted RBP11.25□□□□□ -0.61
DDB1-221ENST00000543162 KCNK16Q96T55 309 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 NUP85Q9BW27 656 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 PBX4Q9BYU1 374 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 UBXN6Q9BZV1 441 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 LRRC4Q9HBW1 653 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 MRPL47Q9HD33 250 aaKnown RBP11.25□□□□□ -0.61
DDB1-221ENST00000543162 ENTPD7Q9NQZ7 604 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 TMEM30AQ9NV96 361 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 FNIP2Q9P278 1114 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 UVRAGQ9P2Y5 699 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 TJP2Q9UDY2 1190 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 CHORDC1Q9UHD1 332 aaPredicted RBP11.25□□□□□ -0.61
DDB1-221ENST00000543162 SALL4Q9UJQ4 1053 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 PLXNA4Q9HCM2 1894 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 PTPRDP23468 1912 aa11.25□□□□□ -0.61
DDB1-221ENST00000543162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.24□□□□□ -0.61
DDB1-221ENST00000543162 WDR27A2RRH5 827 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 F8VP50 259 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 KIF2AO00139 706 aaPredicted RBP11.24□□□□□ -0.61
DDB1-221ENST00000543162 TRIM66O15016 1216 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 LPXNO60711 386 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 LILRB3O75022 631 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 GABBR2O75899 941 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 LCP1P13796 627 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 RPL34P49207 117 aaKnown RBP11.24□□□□□ -0.61
DDB1-221ENST00000543162 NDUFV1P49821 464 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 GNG11P61952 73 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 ADCY1Q08828 1119 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 ADIGQ0VDE8 80 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 MAMLD1Q13495 774 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 RAB33AQ14088 237 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 SMC1AQ14683 1233 aaKnown RBP11.24□□□□□ -0.61
DDB1-221ENST00000543162 ZNF569Q5MCW4 686 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 TPGS2Q68CL5 300 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 NYAP1Q6ZVC0 841 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 SPRED2Q7Z698 418 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 ZDHHC17Q8IUH5 632 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 SCUBE3Q8IX30 993 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 SIX6OS1Q8N1H7 587 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 C3orf20Q8ND61 904 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 ZNF461Q8TAF7 563 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 ZNF564Q8TBZ8 553 aaPredicted RBP11.24□□□□□ -0.61
DDB1-221ENST00000543162 POF1BQ8WVV4 589 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 MCRS1Q96EZ8 462 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 CALR3Q96L12 384 aaKnown RBP11.24□□□□□ -0.61
DDB1-221ENST00000543162 C8orf48Q96LL4 319 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 ALS2CR12Q96Q35 445 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 TCF25Q9BQ70 676 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 SELENOOQ9BVL4 669 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 IRX2Q9BZI1 471 aaPredicted RBP11.24□□□□□ -0.61
DDB1-221ENST00000543162 NKX2-4Q9H2Z4 354 aa11.24□□□□□ -0.61
DDB1-221ENST00000543162 RXFP1Q9HBX9 757 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms