RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 VCXQ9H320 206 aa8.38□□□□□ -1.07
PDLIM5-221ENST00000542407 TCF7L2Q9NQB0 619 aa8.38□□□□□ -1.07
PDLIM5-221ENST00000542407 MORF4L1Q9UBU8 362 aa8.38□□□□□ -1.07
PDLIM5-221ENST00000542407 ZNF180Q9UJW8 692 aa8.38□□□□□ -1.07
PDLIM5-221ENST00000542407 MTUS1Q9ULD2 1270 aa8.38□□□□□ -1.07
PDLIM5-221ENST00000542407 MKL2Q9ULH7 1088 aa8.38□□□□□ -1.07
PDLIM5-221ENST00000542407 CLEC11AQ9Y240 323 aa8.38□□□□□ -1.07
PDLIM5-221ENST00000542407 MCM3APO60318 1980 aa8.38□□□□□ -1.07
PDLIM5-221ENST00000542407 GOLGA8IPA6NC78 632 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 GOLGA8JA6NMD2 632 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 PRSS47A8MTI9 375 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 NPTXRO95502 500 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 PAHP00439 452 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 CETPP11597 493 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 KRT13P13646 458 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 ANXA13P27216 316 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 SOX5P35711 763 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 STAT5BP51692 787 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 POLGP54098 1239 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 FKBP1BP68106 108 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 ENPEPQ07075 957 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 MSLNQ13421 630 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 BRDTQ58F21 947 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 MAMDC4Q6UXC1 1216 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 ARHGEF19Q8IW93 802 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 LRRC43Q8N309 656 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 SLC30A5Q8TAD4 765 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 UCMAQ8WVF2 138 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 SPACA7Q96KW9 195 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 NUDCD1Q96RS6 583 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 TRIM51Q9BSJ1 452 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 DRC3Q9H069 523 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 KATNBL1Q9H079 304 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 ZNF408Q9H9D4 720 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 CLK4Q9HAZ1 481 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 FKBP14Q9NWM8 211 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 ADAMTS1Q9UHI8 967 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 DNAJC12Q9UKB3 198 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 GNEQ9Y223 722 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 UTP11Q9Y3A2 253 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 ZNF236Q9UL36 1845 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 C2orf81A6NN90 581 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 BTNL10A8MVZ5 291 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 MAFO75444 373 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 RNASEH2AO75792 299 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 PCNAP12004 261 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 GARTP22102 1010 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 NAMPTP43490 491 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 GCLMP48507 274 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 GTF2A2P52657 109 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 CYP24A1Q07973 514 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 DRAP1Q14919 205 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 FAM160B1Q5W0V3 765 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 DENND2CQ68D51 928 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 BRSK2Q8IWQ3 736 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 FAM20CQ8IXL6 584 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 SIX5Q8N196 739 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 FITM2Q8N6M3 262 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 TRIML2Q8N7C3 387 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 ANKRD42Q8N9B4 389 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 GPRC5AQ8NFJ5 357 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 CCDC110Q8TBZ0 833 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 COPS5Q92905 334 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 TLCD1Q96CP7 247 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 VPS50Q96JG6 964 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 PBKQ96KB5 322 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 FMO2Q99518 471 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 ARHGEF3Q9NR81 526 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 PDGFCQ9NRA1 345 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 COQ4Q9Y3A0 265 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 CCL15-CCL14A0A0B4J2E2 113 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 IGKV6-21A0A0C4DH24 114 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 DDX3XO00571 662 aaKnown RBP eCLIP8.37□□□□□ -1.078e-10■■■□□ 15.6
PDLIM5-221ENST00000542407 ATP6V1C1P21283 382 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 CAPSQ13938 189 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 NAB2Q15742 525 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 CCL15Q16663 113 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 TAPT1Q6NXT6 567 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 PLPPR4Q7Z2D5 763 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 DGLUCYQ7Z3D6 616 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 LNX1Q8TBB1 728 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 TMC2Q8TDI7 906 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 DNAJC9Q8WXX5 260 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 SEMA4DQ92854 862 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 SH3KBP1Q96B97 665 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 PTPN18Q99952 460 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 CIDEBQ9UHD4 219 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 NAGPAQ9UK23 515 aa8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 NOC2LQ9Y3T9 749 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-221ENST00000542407 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 H0YCG3 227 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 GLULP15104 373 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 CALB2P22676 271 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 STAT1P42224 750 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 PLTPP55058 493 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 WNT7BP56706 349 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 HSD17B7P56937 341 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 CLDN10P78369 228 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 KIF22Q14807 665 aa8.36□□□□□ -1.07
PDLIM5-221ENST00000542407 FAM209AQ5JX71 171 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms