RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ZXDBP98169 803 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 TAF10Q12962 218 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 DENND5BQ6ZUT9 1274 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 RRAGAQ7L523 313 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 GPRIN1Q7Z2K8 1008 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 MON1AQ86VX9 555 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 CREBRFQ8IUR6 639 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 MFSD6LQ8IWD5 586 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 CMTM8Q8IZV2 173 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 SIX5Q8N196 739 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 CCDC150Q8NCX0 1101 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 USP13Q92995 863 aaPredicted RBP10.33□□□□□ -0.76
YBX3-212ENST00000542002 TMEM176AQ96HP8 235 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 FAXDC2Q96IV6 333 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 HEXIM2Q96MH2 286 aaKnown RBP10.33□□□□□ -0.76
YBX3-212ENST00000542002 HNRNPABQ99729 332 aaKnown RBP10.33□□□□□ -0.76
YBX3-212ENST00000542002 ZSWIM1Q9BR11 485 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 TTLL2Q9BWV7 592 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 GPR88Q9GZN0 384 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 RNF38Q9H0F5 515 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 SLITRK6Q9H5Y7 841 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 CSNK1G1Q9HCP0 422 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 KRT82Q9NSB4 513 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 IL37Q9NZH6 218 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 GCNT4Q9P109 453 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 CHORDC1Q9UHD1 332 aaPredicted RBP10.33□□□□□ -0.76
YBX3-212ENST00000542002 CA14Q9ULX7 337 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.33□□□□□ -0.76
YBX3-212ENST00000542002 WDFY4Q6ZS81 3184 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 COL4A3Q01955 1670 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 ZNF840PA6NDX5 716 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 GOLGA6L22H0YM25 854 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 ARNTLO00327 626 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 P4HA2O15460 535 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 FGFR1OPO95684 399 aaKnown RBP10.32□□□□□ -0.76
YBX3-212ENST00000542002 CCDC192P0DO97 292 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 PSMC3P17980 439 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 SLC9A1P19634 815 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 SLC44A4Q53GD3 710 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 MIIPQ5JXC2 388 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 CWF19L1Q69YN2 538 aaKnown RBP10.32□□□□□ -0.76
YBX3-212ENST00000542002 DPY19L2P1Q6NXN4 242 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 GJB7Q6PEY0 223 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 CLEC20AQ6ZU45 233 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 C11orf57Q6ZUT1 292 aaPredicted RBP10.32□□□□□ -0.76
YBX3-212ENST00000542002 NUP93Q8N1F7 819 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 FBXL6Q8N531 539 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 ARL14EPQ8N8R7 260 aaPredicted RBP10.32□□□□□ -0.76
YBX3-212ENST00000542002 SMARCD1Q96GM5 515 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 ZFYVE19Q96K21 471 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 CEP295NLQ96MC4 621 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 KREMEN1Q96MU8 473 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 CRACR2AQ9BSW2 395 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 TRMT61BQ9BVS5 477 aaKnown RBP10.32□□□□□ -0.76
YBX3-212ENST00000542002 INTS2Q9H0H0 1204 aaKnown RBP10.32□□□□□ -0.76
YBX3-212ENST00000542002 THAP9Q9H5L6 903 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 FBXL21Q9UKT6 434 aa10.32□□□□□ -0.76
YBX3-212ENST00000542002 MTF2Q9Y483 593 aaPredicted RBP10.32□□□□□ -0.76
YBX3-212ENST00000542002 FAM92AA1XBS5 289 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 TULP2O00295 520 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 MBD3O95983 291 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 COL9A1P20849 921 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 CD72P21854 359 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 ANXA13P27216 316 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 GDI1P31150 447 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 SLC5A3P53794 718 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 FCHO2Q0JRZ9 810 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 IFRD2Q12894 506 aaPredicted RBP10.31□□□□□ -0.76
YBX3-212ENST00000542002 ARHGAP15Q53QZ3 475 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 CCDC183Q5T5S1 534 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 TTC30AQ86WT1 665 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 TMEM105Q8N8V8 129 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 TFAP2BQ92481 460 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 DUSP16Q9BY84 665 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 TRPC7Q9HCX4 862 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 DMAP1Q9NPF5 467 aaPredicted RBP10.31□□□□□ -0.76
YBX3-212ENST00000542002 HEBP1Q9NRV9 189 aa10.31□□□□□ -0.76
YBX3-212ENST00000542002 UXTQ9UBK9 157 aaPredicted RBP10.31□□□□□ -0.76
YBX3-212ENST00000542002 AJAP1Q9UKB5 411 aaPredicted RBP10.31□□□□□ -0.76
YBX3-212ENST00000542002 OTOL1A6NHN0 477 aaPredicted RBP10.3□□□□□ -0.76
YBX3-212ENST00000542002 ZDHHC11BP0C7U3 371 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 FAM200BP0CF97 657 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 GLULP15104 373 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 HDCP19113 662 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 DDX6P26196 483 aaKnown RBP eCLIP10.3□□□□□ -0.76
YBX3-212ENST00000542002 PON1P27169 355 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 YWHAQP27348 245 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 AVPR2P30518 371 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 MTIF2P46199 727 aaKnown RBP10.3□□□□□ -0.76
YBX3-212ENST00000542002 STARD6P59095 220 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 TNK2Q07912 1038 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 KCNMA1Q12791 1236 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 FZD5Q13467 585 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 CT47A1Q5JQC4 288 aaPredicted RBP10.3□□□□□ -0.76
YBX3-212ENST00000542002 ARHGAP17Q68EM7 881 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 TMEM270Q6UE05 265 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 ZNF687Q8N1G0 1237 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 PPM1KQ8N3J5 372 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 FLCNQ8NFG4 579 aa10.3□□□□□ -0.76
YBX3-212ENST00000542002 TTC8Q8TAM2 541 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms