RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 CTTNQ14247 550 aaKnown RBP10.93□□□□□ -0.66
CHFR-219ENST00000541341 CCDC6Q16204 474 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 PDK4Q16654 411 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 MUM1Q2TAK8 710 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 PRR16Q569H4 304 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 ARSHQ5FYA8 562 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 CELF3Q5SZQ8 465 aaKnown RBP10.93□□□□□ -0.66
CHFR-219ENST00000541341 DAB2IPQ5VWQ8 1189 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 POTEBQ6S5H4 581 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 TRIM72Q6ZMU5 477 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 ANKS1BQ7Z6G8 1248 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 TRIM50Q86XT4 487 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 FAM178BQ8IXR5 827 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 SYCP3Q8IZU3 236 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 MYCT1Q8N699 235 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 DNAJC9Q8WXX5 260 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 ATP6V0A1Q93050 837 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 EMID1Q96A84 441 aaPredicted RBP10.93□□□□□ -0.66
CHFR-219ENST00000541341 CDC42EP4Q9H3Q1 356 aaKnown RBP10.93□□□□□ -0.66
CHFR-219ENST00000541341 UBE2ZQ9H832 354 aaPredicted RBP10.93□□□□□ -0.66
CHFR-219ENST00000541341 MRPL47Q9HD33 250 aaKnown RBP10.93□□□□□ -0.66
CHFR-219ENST00000541341 C11orf16Q9NQ32 467 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 TBC1D22BQ9NU19 505 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.93□□□□□ -0.668e-6■■■□□ 14.7
CHFR-219ENST00000541341 ETAA1Q9NY74 926 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 ADAM22Q9P0K1 906 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 STK38LQ9Y2H1 464 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 MYO7AQ13402 2215 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 GSTTP1A0A1W2PQM5 241 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 C17orf102A2RUQ5 167 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 RSPH10B2B2RC85 870 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 PDLIM1O00151 329 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 C2CD2LO14523 706 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 TM9SF1O15321 606 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 PSTPIP1O43586 416 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 ATP9AO75110 1047 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 LGALS2P05162 132 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 KRT16P08779 473 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 RSPH10BP0C881 870 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 SMIM10L2AP0DMW4 78 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 SMIM10L2BP0DMW5 78 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 GNAZP19086 355 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 ATP4AP20648 1035 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 COMTP21964 271 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 ADCY8P40145 1251 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 KRT17Q04695 432 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 CDK18Q07002 472 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 SPIRE1Q08AE8 756 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 TMEM31Q5JXX7 168 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 LIN9Q5TKA1 542 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 KRT39Q6A163 491 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 DRICH1Q6PGQ1 229 aaPredicted RBP10.92□□□□□ -0.66
CHFR-219ENST00000541341 RHBDF2Q6PJF5 856 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 PHLDB2Q86SQ0 1253 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 GALNT15Q8N3T1 639 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.92□□□□□ -0.66
CHFR-219ENST00000541341 EPS8L3Q8TE67 593 aaKnown RBP10.92□□□□□ -0.66
CHFR-219ENST00000541341 GLG1Q92896 1179 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 CD101Q93033 1021 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 STMN2Q93045 179 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 C18orf8Q96DM3 657 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 VCPIP1Q96JH7 1222 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 ACCSQ96QU6 501 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 UIMC1Q96RL1 719 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 NUDCD1Q96RS6 583 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 ZNF577Q9BSK1 485 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 C16orf70Q9BSU1 422 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 THAP2Q9H0W7 228 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 OSGEPQ9NPF4 335 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 PAPOLBQ9NRJ5 636 aaKnown RBP10.92□□□□□ -0.66
CHFR-219ENST00000541341 ZNF212Q9UDV6 495 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 ANGPTL2Q9UKU9 493 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 VAV3Q9UKW4 847 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 MTO1Q9Y2Z2 717 aaKnown RBP10.92□□□□□ -0.66
CHFR-219ENST00000541341 WDFY4Q6ZS81 3184 aa10.92□□□□□ -0.66
CHFR-219ENST00000541341 RASA4BC9J798 803 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 F8W8V4 182 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 H3BRB1 525 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 NOP56O00567 594 aaKnown RBP10.91□□□□□ -0.66
CHFR-219ENST00000541341 RASA4O43374 803 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 MED24O75448 989 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 TGDSO95455 350 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 IL1BP01584 269 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 AMHP03971 560 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 IBSPP21815 317 aaPredicted RBP10.91□□□□□ -0.66
CHFR-219ENST00000541341 KCNJ2P63252 427 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 PPP2R5CQ13362 524 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 ACCSLQ4AC99 568 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 HHATQ5VTY9 493 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 DCAF12L1Q5VU92 463 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 METTL7BQ6UX53 244 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 ZNF720Q7Z2F6 126 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 CCDC25Q86WR0 208 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 FITM2Q8N6M3 262 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 ZNF564Q8TBZ8 553 aaPredicted RBP10.91□□□□□ -0.66
CHFR-219ENST00000541341 ASAP3Q8TDY4 903 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 ZNF570Q96NI8 536 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 OLFM3Q96PB7 478 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 RNPEPQ9H4A4 650 aa10.91□□□□□ -0.66
CHFR-219ENST00000541341 ST6GALNAC4Q9H4F1 302 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms