RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ANKRD16Q6P6B7 361 aa7.4□□□□□ -1.22
YBX3-210ENST00000540975 GBA2Q9HCG7 927 aaPredicted RBP7.4□□□□□ -1.22
YBX3-210ENST00000540975 DRD4P21917 467 aa7.39□□□□□ -1.23
YBX3-210ENST00000540975 CD38P28907 300 aa7.39□□□□□ -1.23
YBX3-210ENST00000540975 RPS16P62249 146 aaKnown RBP7.39□□□□□ -1.23
YBX3-210ENST00000540975 LY6KQ17RY6 165 aa7.39□□□□□ -1.23
YBX3-210ENST00000540975 PARS2Q7L3T8 475 aaKnown RBP7.39□□□□□ -1.23
YBX3-210ENST00000540975 WDR53Q7Z5U6 358 aaPredicted RBP7.39□□□□□ -1.23
YBX3-210ENST00000540975 OSCP1Q8WVF1 389 aa7.39□□□□□ -1.23
YBX3-210ENST00000540975 R3HDM4Q96D70 268 aa7.39□□□□□ -1.23
YBX3-210ENST00000540975 PPP1R9BQ96SB3 815 aa7.39□□□□□ -1.23
YBX3-210ENST00000540975 STK31Q9BXU1 1019 aa7.39□□□□□ -1.23
YBX3-210ENST00000540975 DDX21Q9NR30 783 aaKnown RBP eCLIP7.39□□□□□ -1.23
YBX3-210ENST00000540975 PCDHGB6Q9Y5F9 930 aa7.39□□□□□ -1.23
YBX3-210ENST00000540975 RASSF9O75901 435 aa7.38□□□□□ -1.23
YBX3-210ENST00000540975 C1RP00736 705 aa7.38□□□□□ -1.23
YBX3-210ENST00000540975 FBLP22087 321 aaKnown RBP7.38□□□□□ -1.23
YBX3-210ENST00000540975 KLRC1P26715 233 aa7.38□□□□□ -1.23
YBX3-210ENST00000540975 INSCQ1MX18 579 aa7.38□□□□□ -1.23
YBX3-210ENST00000540975 AMIGO2Q86SJ2 522 aa7.38□□□□□ -1.23
YBX3-210ENST00000540975 IZUMO1Q8IYV9 350 aa7.38□□□□□ -1.23
YBX3-210ENST00000540975 XAGE5Q8WWM1 108 aa7.38□□□□□ -1.23
YBX3-210ENST00000540975 TTC17Q96AE7 1141 aa7.38□□□□□ -1.23
YBX3-210ENST00000540975 C8orf48Q96LL4 319 aa7.38□□□□□ -1.23
YBX3-210ENST00000540975 CHST8Q9H2A9 424 aa7.38□□□□□ -1.23
YBX3-210ENST00000540975 DUSP22Q9NRW4 184 aa7.38□□□□□ -1.23
YBX3-210ENST00000540975 TRMT13Q9NUP7 481 aaKnown RBP7.38□□□□□ -1.23
YBX3-210ENST00000540975 SNX14Q9Y5W7 946 aa7.38□□□□□ -1.23
YBX3-210ENST00000540975 WNT6Q9Y6F9 365 aa7.38□□□□□ -1.23
YBX3-210ENST00000540975 FNDC1Q4ZHG4 1894 aaPredicted RBP7.37□□□□□ -1.23
YBX3-210ENST00000540975 AOX1Q06278 1338 aa7.37□□□□□ -1.23
YBX3-210ENST00000540975 LOC102723971A0A1B0GUV8 181 aa7.37□□□□□ -1.23
YBX3-210ENST00000540975 H0YIZ8 118 aa7.37□□□□□ -1.23
YBX3-210ENST00000540975 HNRNPCP07910 306 aaKnown RBP eCLIP7.37□□□□□ -1.234e-7■□□□□ 9.3
YBX3-210ENST00000540975 RPL17P18621 184 aaKnown RBP7.37□□□□□ -1.23
YBX3-210ENST00000540975 NPY5RQ15761 445 aa7.37□□□□□ -1.23
YBX3-210ENST00000540975 AARS2Q5JTZ9 985 aaKnown RBP7.37□□□□□ -1.23
YBX3-210ENST00000540975 SYCE2Q6PIF2 218 aa7.37□□□□□ -1.23
YBX3-210ENST00000540975 SPARTQ8N0X7 666 aa7.37□□□□□ -1.23
YBX3-210ENST00000540975 LRRC71Q8N4P6 559 aa7.37□□□□□ -1.23
YBX3-210ENST00000540975 RP9Q8TA86 221 aaKnown RBP7.37□□□□□ -1.23
YBX3-210ENST00000540975 TMEM171Q8WVE6 324 aa7.37□□□□□ -1.23
YBX3-210ENST00000540975 SOCS4Q8WXH5 440 aa7.37□□□□□ -1.23
YBX3-210ENST00000540975 MSLNLQ96KJ4 702 aa7.37□□□□□ -1.23
YBX3-210ENST00000540975 TRIM5Q9C035 493 aa7.37□□□□□ -1.23
YBX3-210ENST00000540975 NUP62CLQ9H1M0 184 aa7.37□□□□□ -1.23
YBX3-210ENST00000540975 DNMT3BQ9UBC3 853 aaKnown RBP7.37□□□□□ -1.23
YBX3-210ENST00000540975 CDY1Q9Y6F8 540 aa7.37□□□□□ -1.23
YBX3-210ENST00000540975 MASP2O00187 686 aa7.36□□□□□ -1.23
YBX3-210ENST00000540975 QSOX1O00391 747 aa7.36□□□□□ -1.23
YBX3-210ENST00000540975 EEFSECP57772 596 aaKnown RBP7.36□□□□□ -1.23
YBX3-210ENST00000540975 CCNIQ14094 377 aa7.36□□□□□ -1.23
YBX3-210ENST00000540975 SLC9A4Q6AI14 798 aa7.36□□□□□ -1.23
YBX3-210ENST00000540975 KCTD20Q7Z5Y7 419 aa7.36□□□□□ -1.23
YBX3-210ENST00000540975 TBC1D5Q92609 795 aa7.36□□□□□ -1.23
YBX3-210ENST00000540975 PHKBQ93100 1093 aa7.36□□□□□ -1.23
YBX3-210ENST00000540975 C17orf80Q9BSJ5 609 aa7.36□□□□□ -1.23
YBX3-210ENST00000540975 APOL5Q9BWW9 433 aa7.36□□□□□ -1.23
YBX3-210ENST00000540975 RGS17Q9UGC6 210 aaPredicted RBP7.36□□□□□ -1.23
YBX3-210ENST00000540975 PADI4Q9UM07 663 aa7.36□□□□□ -1.23
YBX3-210ENST00000540975 TARM1B6A8C7 271 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 H7C4K7 107 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 ZNF213O14771 459 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 CCP110O43303 1012 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 ENGP17813 658 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 ARHGEF7Q14155 803 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 SLC29A2Q14542 456 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 TBC1D25Q3MII6 688 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 PCID2Q5JVF3 399 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 CEP85Q6P2H3 762 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 ZNF788Q6ZQV5 615 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 Q6ZWC4 215 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 CAND1Q86VP6 1230 aaKnown RBP7.35□□□□□ -1.23
YBX3-210ENST00000540975 KRT78Q8N1N4 520 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 DNAJB14Q8TBM8 379 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 STRBPQ96SI9 672 aaKnown RBP7.35□□□□□ -1.23
YBX3-210ENST00000540975 BTBD1Q9H0C5 482 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 DHX36Q9H2U1 1008 aaKnown RBP7.35□□□□□ -1.23
YBX3-210ENST00000540975 CCNL1Q9UK58 526 aaPredicted RBP7.35□□□□□ -1.23
YBX3-210ENST00000540975 HDAC9Q9UKV0 1011 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 GABRQQ9UN88 632 aa7.35□□□□□ -1.23
YBX3-210ENST00000540975 ARHGEF17Q96PE2 2063 aaPredicted RBP7.35□□□□□ -1.23
YBX3-210ENST00000540975 KIF3BO15066 747 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 RGS10O43665 173 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 RBMXL2O75526 392 aaKnown RBP7.34□□□□□ -1.23
YBX3-210ENST00000540975 RASAL1O95294 804 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 VNN1O95497 513 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 TXNP10599 105 aaKnown RBP7.34□□□□□ -1.23
YBX3-210ENST00000540975 IL1R1P14778 569 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 BTF3P20290 206 aaKnown RBP7.34□□□□□ -1.23
YBX3-210ENST00000540975 PRKAR1BP31321 381 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 PTDSS1P48651 473 aaKnown RBP7.34□□□□□ -1.23
YBX3-210ENST00000540975 BCAT1P54687 386 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 PROK1P58294 105 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 C21orf58P58505 322 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 CCDC142Q17RM4 750 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 CERCAMQ5T4B2 595 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 UNC13DQ70J99 1090 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 FANCBQ8NB91 859 aa7.34□□□□□ -1.23
YBX3-210ENST00000540975 RSPRY1Q96DX4 576 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms