RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 SEL1L2Q5TEA6 688 aa25.82■■□□□ 1.72
TTC3-225ENST00000540756 CLEC20AQ6ZU45 233 aa25.82■■□□□ 1.72
TTC3-225ENST00000540756 NIPA2Q8N8Q9 360 aa25.82■■□□□ 1.72
TTC3-225ENST00000540756 FAM193BQ96PV7 902 aaPredicted RBP25.82■■□□□ 1.72
TTC3-225ENST00000540756 C11orf49Q9H6J7 331 aa25.82■■□□□ 1.72
TTC3-225ENST00000540756 KRT82Q9NSB4 513 aa25.82■■□□□ 1.72
TTC3-225ENST00000540756 TMLHEQ9NVH6 421 aa25.82■■□□□ 1.72
TTC3-225ENST00000540756 CDH9Q9ULB4 789 aa25.82■■□□□ 1.72
TTC3-225ENST00000540756 LRCH4O75427 683 aa25.81■■□□□ 1.72
TTC3-225ENST00000540756 PBX3P40426 434 aa25.81■■□□□ 1.72
TTC3-225ENST00000540756 LRRTM3Q86VH5 581 aa25.81■■□□□ 1.72
TTC3-225ENST00000540756 KCNK16Q96T55 309 aa25.81■■□□□ 1.72
TTC3-225ENST00000540756 RAB21Q9UL25 225 aa25.81■■□□□ 1.72
TTC3-225ENST00000540756 PSTPIP1O43586 416 aa25.81■■□□□ 1.72
TTC3-225ENST00000540756 NPR3P17342 541 aa25.81■■□□□ 1.72
TTC3-225ENST00000540756 PLA2G4AP47712 749 aa25.81■■□□□ 1.72
TTC3-225ENST00000540756 RPL34P49207 117 aaKnown RBP25.81■■□□□ 1.72
TTC3-225ENST00000540756 MAP3K7CLP57077 242 aa25.81■■□□□ 1.72
TTC3-225ENST00000540756 SLC6A3Q01959 620 aa25.81■■□□□ 1.72
TTC3-225ENST00000540756 C8orf74Q6P047 294 aa25.81■■□□□ 1.72
TTC3-225ENST00000540756 MYCBPAPQ8TBZ2 947 aa25.81■■□□□ 1.72
TTC3-225ENST00000540756 FNIP1Q8TF40 1166 aa25.81■■□□□ 1.72
TTC3-225ENST00000540756 RXFP2Q8WXD0 754 aa25.81■■□□□ 1.72
TTC3-225ENST00000540756 FNDC1Q4ZHG4 1894 aaPredicted RBP25.8■■□□□ 1.72
TTC3-225ENST00000540756 ZSCAN5CA6NGD5 496 aaPredicted RBP25.8■■□□□ 1.72
TTC3-225ENST00000540756 C2CD4BA6NLJ0 364 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 CLTBP09497 229 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 HSPA1AP0DMV8 641 aaKnown RBP25.8■■□□□ 1.72
TTC3-225ENST00000540756 HSPA1BP0DMV9 641 aaKnown RBP25.8■■□□□ 1.72
TTC3-225ENST00000540756 IL1R2P27930 398 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 PLCB3Q01970 1234 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 C15orf59Q2T9L4 293 aaPredicted RBP25.8■■□□□ 1.72
TTC3-225ENST00000540756 OVOS1Q6IE37 1185 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 METTL23Q86XA0 190 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 SLC13A5Q86YT5 568 aaPredicted RBP25.8■■□□□ 1.72
TTC3-225ENST00000540756 CFAP57Q96MR6 1250 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 DNAI2Q9GZS0 605 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 VWA8A3KMH1 1905 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 PI4K2BG5E9Z4 385 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 XPO1O14980 1071 aaKnown RBP25.8■■□□□ 1.72
TTC3-225ENST00000540756 RAD51CO43502 376 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 UPP2O95045 317 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 NDUFV1P49821 464 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 FAM35AQ86V20 835 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 RNF25Q96BH1 459 aaPredicted RBP25.8■■□□□ 1.72
TTC3-225ENST00000540756 SMOQ99835 787 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 ACBD6Q9BR61 282 aa25.8■■□□□ 1.72
TTC3-225ENST00000540756 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.8■■□□□ 1.72
TTC3-225ENST00000540756 TBKBP1A7MCY6 615 aa25.79■■□□□ 1.72
TTC3-225ENST00000540756 NRP1O14786 923 aa25.79■■□□□ 1.72
TTC3-225ENST00000540756 SART1O43290 800 aaKnown RBP25.79■■□□□ 1.72
TTC3-225ENST00000540756 SEC31AO94979 1220 aaKnown RBP25.79■■□□□ 1.72
TTC3-225ENST00000540756 GLI1P08151 1106 aa25.79■■□□□ 1.72
TTC3-225ENST00000540756 PDGFRAP16234 1089 aa25.79■■□□□ 1.72
TTC3-225ENST00000540756 PCSK1P29120 753 aa25.79■■□□□ 1.72
TTC3-225ENST00000540756 PKN2Q16513 984 aaKnown RBP25.79■■□□□ 1.72
TTC3-225ENST00000540756 SMTNL2Q2TAL5 461 aa25.79■■□□□ 1.72
TTC3-225ENST00000540756 ZMIZ2Q8NF64 920 aa25.79■■□□□ 1.72
TTC3-225ENST00000540756 MYLPFQ96A32 169 aa25.79■■□□□ 1.72
TTC3-225ENST00000540756 ZNF446Q9NWS9 450 aa25.79■■□□□ 1.72
TTC3-225ENST00000540756 NT5C1B-RDH14C9J2C7 533 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 AP1G2O75843 785 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 FAM200BP0CF97 657 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 ZNF143P52747 638 aaPredicted RBP25.78■■□□□ 1.72
TTC3-225ENST00000540756 SLC25A11Q02978 314 aaKnown RBP25.78■■□□□ 1.72
TTC3-225ENST00000540756 ADIGQ0VDE8 80 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 INTS6LQ5JSJ4 861 aaKnown RBP25.78■■□□□ 1.72
TTC3-225ENST00000540756 KCNT1Q5JUK3 1230 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 FAM171BQ6P995 826 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 NPAS4Q8IUM7 802 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 KATNAL2Q8IYT4 538 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 UBE2Q2Q8WVN8 375 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 B3GALT6Q96L58 329 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 PKMYT1Q99640 499 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 HEMGNQ9BXL5 484 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 ZWILCHQ9H900 591 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 PCSK1NQ9UHG2 260 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 AMACRQ9UHK6 382 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 TRIM43BA6NCK2 446 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 OR4Q2P0C623 313 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 TFE3P19532 575 aaPredicted RBP25.78■■□□□ 1.72
TTC3-225ENST00000540756 GPD1P21695 349 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 SIX1Q15475 284 aaPredicted RBP25.78■■□□□ 1.72
TTC3-225ENST00000540756 CDO1Q16878 200 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 CCDC14Q49A88 953 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 GPRIN1Q7Z2K8 1008 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 TMCO2Q7Z6W1 182 aaPredicted RBP25.78■■□□□ 1.72
TTC3-225ENST00000540756 CCDC50Q8IVM0 306 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 GSPT2Q8IYD1 628 aaKnown RBP25.78■■□□□ 1.72
TTC3-225ENST00000540756 PRELID2Q8N945 189 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 ANKLE1Q8NAG6 615 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 RAPGEF5Q92565 580 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 TRIM43Q96BQ3 446 aaPredicted RBP25.78■■□□□ 1.72
TTC3-225ENST00000540756 HSFY1Q96LI6 401 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 DSEQ9UL01 958 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 PCDHB8Q9UN66 801 aa25.78■■□□□ 1.72
TTC3-225ENST00000540756 TARSL2A2RTX5 802 aaKnown RBP25.77■■□□□ 1.72
TTC3-225ENST00000540756 TADA2AO75478 443 aa25.77■■□□□ 1.72
TTC3-225ENST00000540756 RARAP10276 462 aa25.77■■□□□ 1.72
TTC3-225ENST00000540756 SLC11A1P49279 550 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms