RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 ZBED1O96006 694 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 SMPD1P17405 629 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 GPD1P21695 349 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 ACTN3Q08043 901 aaPredicted RBP17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 PPP2R5DQ14738 602 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 CDCA2Q69YH5 1023 aaPredicted RBP17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 SYDE1Q6ZW31 735 aaPredicted RBP17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 XYLT1Q86Y38 959 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 TMEM174Q8WUU8 243 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 KAT2BQ92831 832 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 TIMM13Q9Y5L4 95 aaPredicted RBP17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 SIGLEC16A6NMB1 481 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 DGKDQ16760 1214 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 CCDC142Q17RM4 750 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 PAN2Q504Q3 1202 aaKnown RBP17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 CCDC125Q86Z20 511 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 FAM172AQ8WUF8 416 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 TBC1D31Q96DN5 1066 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 SERPINB12Q96P63 405 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 PITPNM3Q9BZ71 974 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 MAGEB5Q9BZ81 275 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 GCOM2Q9BZD3 368 aaPredicted RBP17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 SNX25Q9H3E2 840 aa17.89■□□□□ 0.45
EPB41L3-204ENST00000540638 E2F5Q15329 346 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 KIF2BQ8N4N8 673 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 FBXO36Q8NEA4 188 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 ZNF518BQ9C0D4 1074 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 PDE4DIPQ5VU43 2346 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 FAM189A1O60320 539 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 LGR5O75473 907 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 ARL4CP56559 192 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 ROR1Q01973 937 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 TCEAL1Q15170 157 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 PPP1R2P3Q6NXS1 205 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 ARHGEF18Q6ZSZ5 1173 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 GPR142Q7Z601 462 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 NME8Q8N427 588 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 DPEP3Q9H4B8 488 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 BARX2Q9UMQ3 279 aaPredicted RBP17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 TTLL3Q9Y4R7 772 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 TCRBV7S3A2A0A539 114 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 A6NJR5 290 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 MCF2P10911 925 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 MSH2P43246 934 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 ZNF132P52740 706 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 NME3Q13232 169 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 ACVR2BQ13705 512 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 ALLCQ8N6M5 410 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 CCNYQ8ND76 341 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 CLEC4CQ8WTT0 213 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 OSBPL7Q9BZF2 842 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 ROPN1BQ9BZX4 212 aaPredicted RBP17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 ROPN1Q9HAT0 212 aaPredicted RBP17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 ABCF3Q9NUQ8 709 aa17.88■□□□□ 0.45
EPB41L3-204ENST00000540638 A0A1W2PPM1 405 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 TSPAN1O60635 241 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 CILPO75339 1184 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 RECQL4O94761 1208 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 RPL22P35268 128 aaKnown RBP17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 TAP1Q03518 808 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 MPP2Q14168 576 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 PMF1Q6P1K2 205 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 IQCGQ9H095 443 aaKnown RBP17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 DCTN4Q9UJW0 460 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 CREB3O43889 395 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 VDRP11473 427 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 STAT4Q14765 748 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 FAM131BQ86XD5 332 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 MAP7D3Q8IWC1 876 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 PPM1NQ8N819 430 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 KRT4P19013 534 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 IL9RQ01113 521 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 VSIG1Q86XK7 387 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 CCDC110Q8TBZ0 833 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 FBF1Q8TES7 1133 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 ADAM7Q9H2U9 754 aa17.87■□□□□ 0.45
EPB41L3-204ENST00000540638 ABLIM1O14639 778 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 NUMBP49757 651 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 TAPT1Q6NXT6 567 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 SPATS2Q86XZ4 545 aaKnown RBP17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 CCDC63Q8NA47 563 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 BEST2Q8NFU1 509 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 BRI3BPQ8WY22 251 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 LBHD1Q9BQE6 289 aaPredicted RBP17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 SLCO1B3Q9NPD5 702 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 KLHL14Q9P2G3 628 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 IGKV6-21A0A0C4DH24 114 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 DNM1LO00429 736 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 SUN1O94901 812 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 HMGCRP04035 888 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 ATP2A2P16615 1042 aaKnown RBP17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 ARFGAP1Q8N6T3 406 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 LRRC8CQ8TDW0 803 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 TINF2Q9BSI4 451 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 FER1L6Q2WGJ9 1857 aa17.86■□□□□ 0.45
EPB41L3-204ENST00000540638 ZNF646O15015 1829 aaPredicted RBP17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 DNAJC25-GNG10A0A024R161 153 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 OVGP1Q12889 678 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 DOCK1Q14185 1865 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms