RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 TTC39BQ5VTQ0 682 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-209ENST00000539584 ANKRD22Q5VYY1 191 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 TXNRD3NBQ6F5E7 133 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 SLC26A11Q86WA9 606 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 TMPRSS6Q8IU80 811 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 RFWD2Q8NHY2 731 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 TTC8Q8TAM2 541 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 FAM136AQ96C01 138 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 HAUS1Q96CS2 278 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 MRRFQ96E11 262 aaKnown RBP13.86□□□□□ -0.19
UBE3B-209ENST00000539584 SIKE1Q9BRV8 207 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 TMEM120AQ9BXJ8 343 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 IQCGQ9H095 443 aaKnown RBP13.86□□□□□ -0.19
UBE3B-209ENST00000539584 KCNK13Q9HB14 408 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 RARBP10826 455 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 BRD2P25440 801 aaKnown RBP13.85□□□□□ -0.19
UBE3B-209ENST00000539584 CCNHP51946 323 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-209ENST00000539584 EIF3EP60228 445 aaKnown RBP13.85□□□□□ -0.19
UBE3B-209ENST00000539584 TRPC3Q13507 836 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 GSTA3Q16772 222 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 BBS9Q3SYG4 887 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 SNX30Q5VWJ9 437 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 C4orf22Q6V702 233 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 EXOC8Q8IYI6 725 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 ZNF483Q8TF39 744 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-209ENST00000539584 LRRC39Q96DD0 335 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 MTBPQ96DY7 904 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 OXNAD1Q96HP4 312 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-209ENST00000539584 ZBTB45Q96K62 511 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-209ENST00000539584 SH3GL3Q99963 347 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 FAM167BQ9BTA0 163 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 MRPL4Q9BYD3 311 aaKnown RBP13.85□□□□□ -0.19
UBE3B-209ENST00000539584 SLC17A7Q9P2U7 560 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 SORCS3Q9UPU3 1222 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 TEX264Q9Y6I9 313 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 TCRBV9S1A1TA0A576 114 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 I3L4J1 428 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 RAD17O75943 681 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 RNF8O76064 485 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 PSMG1O95456 288 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 CST3P01034 146 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-209ENST00000539584 SERPINB3P29508 390 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 CHRNA5P30532 468 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 RFC1P35251 1148 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-209ENST00000539584 GDF10P55107 478 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 AP1B1Q10567 949 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 TFDP2Q14188 446 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 C6orf163Q5TEZ5 329 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 KCTD6Q8NC69 237 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 CCDC110Q8TBZ0 833 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 TMEM143Q96AN5 459 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 WDR83Q9BRX9 315 aaKnown RBP13.85□□□□□ -0.19
UBE3B-209ENST00000539584 CCDC28BQ9BUN5 200 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 MIS12Q9H081 205 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 NRBP2Q9NSY0 501 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 ARL8BQ9NVJ2 186 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 NMRK1Q9NWW6 199 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 TAS2R1Q9NYW7 299 aa13.85□□□□□ -0.19
UBE3B-209ENST00000539584 WDR81Q562E7 1941 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 IGKV6D-21A0A0A0MT36 114 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 WDR91A4D1P6 747 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 H0Y3Z8 333 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 COPEO14579 308 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 GAS2O43903 313 aaKnown RBP13.84□□□□□ -0.19
UBE3B-209ENST00000539584 SKAP2O75563 359 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-209ENST00000539584 TMEM63AO94886 807 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 SNRPAP09012 282 aaKnown RBP13.84□□□□□ -0.19
UBE3B-209ENST00000539584 RBP3P10745 1247 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 SERPINB4P48594 390 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 KPNB1Q14974 876 aaKnown RBP13.84□□□□□ -0.19
UBE3B-209ENST00000539584 EFTUD2Q15029 972 aaKnown RBP eCLIP13.84□□□□□ -0.19
UBE3B-209ENST00000539584 RCN1Q15293 331 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 DNAL1Q4LDG9 190 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 LRRC74BQ6ZQY2 392 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 LRRC6Q86X45 466 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 SLC4A11Q8NBS3 891 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 REPS2Q8NFH8 660 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 FAM84AQ96KN4 292 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 FAM124BQ9H5Z6 455 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-209ENST00000539584 AS3MTQ9HBK9 375 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 ASNSD1Q9NWL6 643 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 PAK5Q9P286 719 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 SCOCQ9UIL1 159 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 ANGPTL2Q9UKU9 493 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 ADAMTS5Q9UNA0 930 aa13.84□□□□□ -0.19
UBE3B-209ENST00000539584 SSC5DA1L4H1 1573 aa13.83□□□□□ -0.19
UBE3B-209ENST00000539584 DPPA5A6NC42 116 aa13.83□□□□□ -0.2
UBE3B-209ENST00000539584 WNT10BO00744 389 aa13.83□□□□□ -0.2
UBE3B-209ENST00000539584 OGTO15294 1046 aa13.83□□□□□ -0.2
UBE3B-209ENST00000539584 FAM189A1O60320 539 aa13.83□□□□□ -0.2
UBE3B-209ENST00000539584 ENDOD1O94919 500 aa13.83□□□□□ -0.2
UBE3B-209ENST00000539584 SSTR3P32745 418 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-209ENST00000539584 ELK3P41970 407 aa13.83□□□□□ -0.2
UBE3B-209ENST00000539584 MYL6P60660 151 aa13.83□□□□□ -0.2
UBE3B-209ENST00000539584 BASP1P80723 227 aaKnown RBP13.83□□□□□ -0.2
UBE3B-209ENST00000539584 MXRA7P84157 204 aa13.83□□□□□ -0.2
UBE3B-209ENST00000539584 ROR1Q01973 937 aa13.83□□□□□ -0.2
UBE3B-209ENST00000539584 OVGP1Q12889 678 aa13.83□□□□□ -0.2
UBE3B-209ENST00000539584 C11orf91Q3C1V1 193 aa13.83□□□□□ -0.2
UBE3B-209ENST00000539584 ACSBG2Q5FVE4 666 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms