RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 LRIG3Q6UXM1 1119 aa26.8■■□□□ 1.88
KLHL42-202ENST00000539176 DSTYKQ6XUX3 929 aa26.8■■□□□ 1.88
KLHL42-202ENST00000539176 KATNAL2Q8IYT4 538 aa26.8■■□□□ 1.88
KLHL42-202ENST00000539176 URGCPQ8TCY9 931 aa26.8■■□□□ 1.88
KLHL42-202ENST00000539176 SLCO2A1Q92959 643 aa26.8■■□□□ 1.88
KLHL42-202ENST00000539176 DDX27Q96GQ7 796 aaKnown RBP26.8■■□□□ 1.88
KLHL42-202ENST00000539176 FAM204AQ9H8W3 233 aa26.8■■□□□ 1.88
KLHL42-202ENST00000539176 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.8■■□□□ 1.88
KLHL42-202ENST00000539176 O00370 1275 aa26.79■■□□□ 1.88
KLHL42-202ENST00000539176 CDR1P51861 262 aa26.79■■□□□ 1.88
KLHL42-202ENST00000539176 TIGD5Q53EQ6 642 aa26.79■■□□□ 1.88
KLHL42-202ENST00000539176 DNAJC24Q6P3W2 148 aa26.79■■□□□ 1.88
KLHL42-202ENST00000539176 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.79■■□□□ 1.88
KLHL42-202ENST00000539176 TOP6BLQ8N6T0 577 aa26.79■■□□□ 1.88
KLHL42-202ENST00000539176 C18orf8Q96DM3 657 aa26.79■■□□□ 1.88
KLHL42-202ENST00000539176 ZIM3Q96PE6 472 aa26.79■■□□□ 1.88
KLHL42-202ENST00000539176 TRIM51Q9BSJ1 452 aa26.79■■□□□ 1.88
KLHL42-202ENST00000539176 ELAC1Q9H777 363 aaKnown RBP26.79■■□□□ 1.88
KLHL42-202ENST00000539176 HCSTQ9UBK5 93 aa26.79■■□□□ 1.88
KLHL42-202ENST00000539176 CYTH4Q9UIA0 394 aa26.79■■□□□ 1.88
KLHL42-202ENST00000539176 LRFN2Q9ULH4 789 aa26.79■■□□□ 1.88
KLHL42-202ENST00000539176 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.79■■□□□ 1.88
KLHL42-202ENST00000539176 COILP38432 576 aaPredicted RBP26.79■■□□□ 1.88
KLHL42-202ENST00000539176 PTGIRP43119 386 aa26.79■■□□□ 1.88
KLHL42-202ENST00000539176 CCDC142Q17RM4 750 aa26.79■■□□□ 1.88
KLHL42-202ENST00000539176 DDX42Q86XP3 938 aaKnown RBP eCLIP26.79■■□□□ 1.88
KLHL42-202ENST00000539176 UBA3Q8TBC4 463 aa26.79■■□□□ 1.88
KLHL42-202ENST00000539176 TCRBV5S1A1TA0A578 114 aa26.78■■□□□ 1.88
KLHL42-202ENST00000539176 TMEM191CA6NGB0 347 aa26.78■■□□□ 1.88
KLHL42-202ENST00000539176 PARNO95453 639 aaKnown RBP26.78■■□□□ 1.88
KLHL42-202ENST00000539176 RARAP10276 462 aa26.78■■□□□ 1.88
KLHL42-202ENST00000539176 ACAT1P24752 427 aaKnown RBP26.78■■□□□ 1.88
KLHL42-202ENST00000539176 RNASELQ05823 741 aaKnown RBP26.78■■□□□ 1.88
KLHL42-202ENST00000539176 ERICH1Q86X53 443 aa26.78■■□□□ 1.88
KLHL42-202ENST00000539176 C3orf20Q8ND61 904 aa26.78■■□□□ 1.88
KLHL42-202ENST00000539176 FMO2Q99518 471 aa26.78■■□□□ 1.88
KLHL42-202ENST00000539176 HOMER3Q9NSC5 361 aa26.78■■□□□ 1.88
KLHL42-202ENST00000539176 DNAJB4Q9UDY4 337 aa26.78■■□□□ 1.88
KLHL42-202ENST00000539176 GOLGA6CA6NDK9 693 aa26.77■■□□□ 1.88
KLHL42-202ENST00000539176 M0QYV0 167 aa26.77■■□□□ 1.88
KLHL42-202ENST00000539176 GOLGA6DP0CG33 693 aa26.77■■□□□ 1.88
KLHL42-202ENST00000539176 WARSP23381 471 aaKnown RBP26.77■■□□□ 1.88
KLHL42-202ENST00000539176 GSCP56915 257 aaPredicted RBP26.77■■□□□ 1.88
KLHL42-202ENST00000539176 PPP1R26Q5T8A7 1209 aaPredicted RBP26.77■■□□□ 1.88
KLHL42-202ENST00000539176 LRRC38Q5VT99 294 aa26.77■■□□□ 1.88
KLHL42-202ENST00000539176 UNC93AQ86WB7 457 aa26.77■■□□□ 1.88
KLHL42-202ENST00000539176 ZDHHC14Q8IZN3 488 aa26.77■■□□□ 1.88
KLHL42-202ENST00000539176 RIN2Q8WYP3 895 aaPredicted RBP26.77■■□□□ 1.88
KLHL42-202ENST00000539176 CASD1Q96PB1 797 aa26.77■■□□□ 1.88
KLHL42-202ENST00000539176 GOLGA6AQ9NYA3 693 aa26.77■■□□□ 1.88
KLHL42-202ENST00000539176 ATP2C2O75185 946 aa26.76■■□□□ 1.88
KLHL42-202ENST00000539176 CETN2P41208 172 aa26.76■■□□□ 1.88
KLHL42-202ENST00000539176 PSMC1P62191 440 aaKnown RBP26.76■■□□□ 1.88
KLHL42-202ENST00000539176 DSC1Q08554 894 aa26.76■■□□□ 1.88
KLHL42-202ENST00000539176 CNGA2Q16280 664 aa26.76■■□□□ 1.88
KLHL42-202ENST00000539176 GOLGA7BQ2TAP0 167 aa26.76■■□□□ 1.88
KLHL42-202ENST00000539176 SYDE1Q6ZW31 735 aaPredicted RBP26.76■■□□□ 1.88
KLHL42-202ENST00000539176 ABI1Q8IZP0 508 aa26.76■■□□□ 1.88
KLHL42-202ENST00000539176 CRIPAKQ8N1N5 446 aa26.76■■□□□ 1.88
KLHL42-202ENST00000539176 EXD1Q8NHP7 514 aa26.76■■□□□ 1.88
KLHL42-202ENST00000539176 NEUROG2Q9H2A3 272 aa26.76■■□□□ 1.88
KLHL42-202ENST00000539176 DPH5Q9H2P9 285 aa26.76■■□□□ 1.88
KLHL42-202ENST00000539176 TJP2Q9UDY2 1190 aa26.76■■□□□ 1.88
KLHL42-202ENST00000539176 CSF2RAP15509 400 aa26.76■■□□□ 1.87
KLHL42-202ENST00000539176 TTC27Q6P3X3 843 aa26.76■■□□□ 1.87
KLHL42-202ENST00000539176 TMC3Q7Z5M5 1100 aa26.76■■□□□ 1.87
KLHL42-202ENST00000539176 CCDC105Q8IYK2 499 aa26.76■■□□□ 1.87
KLHL42-202ENST00000539176 COLGALT2Q8IYK4 626 aa26.76■■□□□ 1.87
KLHL42-202ENST00000539176 NIPA2Q8N8Q9 360 aa26.76■■□□□ 1.87
KLHL42-202ENST00000539176 FAM76AQ8TAV0 307 aa26.76■■□□□ 1.87
KLHL42-202ENST00000539176 UROC1Q96N76 676 aa26.76■■□□□ 1.87
KLHL42-202ENST00000539176 TSPAN16Q9UKR8 245 aa26.76■■□□□ 1.87
KLHL42-202ENST00000539176 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.76■■□□□ 1.87
KLHL42-202ENST00000539176 UPP2O95045 317 aa26.75■■□□□ 1.87
KLHL42-202ENST00000539176 ECEL1O95672 775 aa26.75■■□□□ 1.87
KLHL42-202ENST00000539176 TIMP1P01033 207 aa26.75■■□□□ 1.87
KLHL42-202ENST00000539176 CCDC130P13994 396 aa26.75■■□□□ 1.87
KLHL42-202ENST00000539176 OR1G1P47890 313 aa26.75■■□□□ 1.87
KLHL42-202ENST00000539176 GYS2P54840 703 aa26.75■■□□□ 1.87
KLHL42-202ENST00000539176 PIGHQ14442 188 aaPredicted RBP26.75■■□□□ 1.87
KLHL42-202ENST00000539176 PPP1R15BQ5SWA1 713 aa26.75■■□□□ 1.87
KLHL42-202ENST00000539176 PIK3R5Q8WYR1 880 aa26.75■■□□□ 1.87
KLHL42-202ENST00000539176 WDR35Q9P2L0 1181 aa26.75■■□□□ 1.87
KLHL42-202ENST00000539176 FEZ2Q9UHY8 353 aaPredicted RBP26.75■■□□□ 1.87
KLHL42-202ENST00000539176 PRG3Q9Y2Y8 225 aaPredicted RBP26.75■■□□□ 1.87
KLHL42-202ENST00000539176 TSC2P49815 1807 aa26.75■■□□□ 1.87
KLHL42-202ENST00000539176 TCRBV7S2A1N4TA0A589 114 aa26.74■■□□□ 1.87
KLHL42-202ENST00000539176 GJB6O95452 261 aa26.74■■□□□ 1.87
KLHL42-202ENST00000539176 CYP4A22Q5TCH4 519 aa26.74■■□□□ 1.87
KLHL42-202ENST00000539176 CNKSR3Q6P9H4 555 aa26.74■■□□□ 1.87
KLHL42-202ENST00000539176 DCUN1D2Q6PH85 259 aa26.74■■□□□ 1.87
KLHL42-202ENST00000539176 GRK7Q8WTQ7 553 aa26.74■■□□□ 1.87
KLHL42-202ENST00000539176 ZDHHC18Q9NUE0 388 aa26.74■■□□□ 1.87
KLHL42-202ENST00000539176 HSD17B3P37058 310 aa26.74■■□□□ 1.87
KLHL42-202ENST00000539176 PTPN20Q4JDL3 420 aa26.74■■□□□ 1.87
KLHL42-202ENST00000539176 KIAA0319Q5VV43 1072 aa26.74■■□□□ 1.87
KLHL42-202ENST00000539176 DCLRE1AQ6PJP8 1040 aa26.74■■□□□ 1.87
KLHL42-202ENST00000539176 LCLAT1Q6UWP7 414 aa26.74■■□□□ 1.87
KLHL42-202ENST00000539176 CRYBG2Q8N1P7 616 aa26.74■■□□□ 1.87
KLHL42-202ENST00000539176 RBM41Q96IZ5 413 aaKnown RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms