RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ZZEF1O43149 2961 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 GDF9O60383 454 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 TACC1O75410 805 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 RPP40O75818 363 aaKnown RBP13.36□□□□□ -0.27
VAMP1-206ENST00000538970 CST3P01034 146 aaPredicted RBP13.36□□□□□ -0.27
VAMP1-206ENST00000538970 PDGFRBP09619 1106 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 TNNI1P19237 187 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 CASP1P29466 404 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 GRIK1P39086 918 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 CYP2J2P51589 502 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 USP46P62068 366 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 SNRPFP62306 86 aaKnown RBP13.36□□□□□ -0.27
VAMP1-206ENST00000538970 CYP27A1Q02318 531 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 CYP24A1Q07973 514 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 BMT2Q1RMZ1 405 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 FBXO43Q4G163 708 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 MDH1BQ5I0G3 518 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 DENND5BQ6ZUT9 1274 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 NELFCDQ8IXH7 590 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 XXYLT1Q8NBI6 393 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 TTC16Q8NEE8 873 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 MYCBPAPQ8TBZ2 947 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 CD101Q93033 1021 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 EXOC4Q96A65 974 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 CCDC127Q96BQ5 260 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 FNBP1Q96RU3 617 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 TTLL2Q9BWV7 592 aa13.36□□□□□ -0.27
VAMP1-206ENST00000538970 TRIM66O15016 1216 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 CLIC2O15247 247 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 FOXD2O60548 495 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-206ENST00000538970 STAU1O95793 577 aaKnown RBP13.35□□□□□ -0.27
VAMP1-206ENST00000538970 PFKLP17858 780 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 HDCP19113 662 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 ANXA13P27216 316 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 PMLP29590 882 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 PDE6CP51160 858 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 NOP14P78316 857 aaKnown RBP13.35□□□□□ -0.27
VAMP1-206ENST00000538970 ZXDBP98169 803 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 FOXD4L5Q5VV16 416 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-206ENST00000538970 HS2ST1Q7LGA3 356 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 C12orf56Q8IXR9 622 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 CAMKK1Q8N5S9 505 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 RPLP0P6Q8NHW5 317 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 FOXD4L4Q8WXT5 416 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-206ENST00000538970 C8orf48Q96LL4 319 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 BLZF1Q9H2G9 400 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 SNX25Q9H3E2 840 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 POLR3BQ9NW08 1133 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-206ENST00000538970 EHD2Q9NZN4 543 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 TRPM5Q9NZQ8 1165 aa13.35□□□□□ -0.27
VAMP1-206ENST00000538970 ZNF840PA6NDX5 716 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 F8VP50 259 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 POLR2DO15514 142 aaKnown RBP13.34□□□□□ -0.27
VAMP1-206ENST00000538970 AKAP3O75969 853 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 EPN2O95208 641 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 NFATC1O95644 943 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 OLFM2O95897 454 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 FAM163BP0C2L3 166 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 CCDC192P0DO97 292 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 GNL1P36915 607 aaPredicted RBP13.34□□□□□ -0.27
VAMP1-206ENST00000538970 RAP1GAPP47736 663 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 CACNA2D1P54289 1103 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 TNNC1P63316 161 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 WDR72Q3MJ13 1102 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 N4BP2L1Q5TBK1 243 aaPredicted RBP13.34□□□□□ -0.27
VAMP1-206ENST00000538970 SYT13Q7L8C5 426 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 CACNA2D4Q7Z3S7 1137 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 KBTBD6Q86V97 674 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 OR6B3Q8NGW1 331 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 ZNF516Q92618 1163 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 SNX21Q969T3 373 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 ACDQ96AP0 544 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 LOXL4Q96JB6 756 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 HHIPQ96QV1 700 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 XYLT2Q9H1B5 865 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 LINC00597Q9H2U6 94 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 DPEP3Q9H4B8 488 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 SLC39A2Q9NP94 309 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 TMEM30AQ9NV96 361 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 CGNQ9P2M7 1197 aaKnown RBP13.34□□□□□ -0.27
VAMP1-206ENST00000538970 PTPRDP23468 1912 aa13.34□□□□□ -0.27
VAMP1-206ENST00000538970 HELZP42694 1942 aaKnown RBP13.34□□□□□ -0.27
VAMP1-206ENST00000538970 FAM208BQ5VWN6 2430 aa13.33□□□□□ -0.27
VAMP1-206ENST00000538970 GREB1Q4ZG55 1949 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 PVALEFA0A1B0GWK0 134 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 LEFTY2O00292 366 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 AXIN1O15169 862 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 F13A1P00488 732 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.28
VAMP1-206ENST00000538970 PTPN1P18031 435 aaKnown RBP13.33□□□□□ -0.28
VAMP1-206ENST00000538970 PPP3CCP48454 512 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 MYL6P60660 151 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 SLC7A9P82251 487 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 TRPC3Q13507 836 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 CUL4BQ13620 913 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 GAB4Q2WGN9 574 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 FOXD4L6Q3SYB3 417 aaPredicted RBP13.33□□□□□ -0.28
VAMP1-206ENST00000538970 RESP18Q5W5W9 173 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 FOXD4L3Q6VB84 417 aaPredicted RBP13.33□□□□□ -0.28
VAMP1-206ENST00000538970 PLEKHO2Q8TD55 490 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms