RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ZCCHC9Q8N567 271 aaKnown RBP7.03□□□□□ -1.28
USP28-207ENST00000538475 LNX1Q8TBB1 728 aaPredicted RBP7.03□□□□□ -1.28
USP28-207ENST00000538475 RAB3IL1Q8TBN0 382 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 SNX29Q8TEQ0 813 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 ZNF75CPQ92670 426 aaPredicted RBP7.03□□□□□ -1.28
USP28-207ENST00000538475 ALG3Q92685 438 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 SKA1Q96BD8 255 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 C18orf8Q96DM3 657 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 NLRP4Q96MN2 994 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 TSPAN18Q96SJ8 248 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 MIPEPQ99797 713 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 EIF2AQ9BY44 585 aaKnown RBP7.03□□□□□ -1.28
USP28-207ENST00000538475 BRD8Q9H0E9 1235 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 TRABDQ9H4I3 376 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 FAM96AQ9H5X1 160 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 STN1Q9H668 368 aaKnown RBP7.03□□□□□ -1.28
USP28-207ENST00000538475 GREM2Q9H772 168 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 KCNK4Q9NYG8 393 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 TAS2R1Q9NYW7 299 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 HSFX1Q9UBD0 423 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 SUN2Q9UH99 717 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 BCAP29Q9UHQ4 241 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 SQORQ9Y6N5 450 aa7.03□□□□□ -1.28
USP28-207ENST00000538475 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.03□□□□□ -1.28
USP28-207ENST00000538475 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.02□□□□□ -1.29
USP28-207ENST00000538475 KANSL1LA0AUZ9 987 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 SH3PXD2BA1X283 911 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 H0YJX3 145 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 ZNF701M0R085 212 aaPredicted RBP7.02□□□□□ -1.29
USP28-207ENST00000538475 IRS4O14654 1257 aaPredicted RBP7.02□□□□□ -1.29
USP28-207ENST00000538475 ATP2A1O14983 1001 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 NKRFO15226 690 aaKnown RBP eCLIP7.02□□□□□ -1.29
USP28-207ENST00000538475 TYROBPO43914 113 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 CLASP2O75122 1294 aaKnown RBP7.02□□□□□ -1.29
USP28-207ENST00000538475 LRRN2O75325 713 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 CBX6O95503 412 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 ACSL3O95573 720 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 CYP1A1P04798 512 aaPredicted RBP7.02□□□□□ -1.29
USP28-207ENST00000538475 HNRNPCP07910 306 aaKnown RBP eCLIP7.02□□□□□ -1.29
USP28-207ENST00000538475 SLC9A1P19634 815 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 PSMC2P35998 433 aaKnown RBP7.02□□□□□ -1.29
USP28-207ENST00000538475 CETN2P41208 172 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 TXKP42681 527 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 SCNN1BP51168 640 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 NAPAP54920 295 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 NR1H2P55055 460 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 GEMIN4P57678 1058 aaKnown RBP7.02□□□□□ -1.29
USP28-207ENST00000538475 KRT17Q04695 432 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 CDC16Q13042 620 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 MPP3Q13368 585 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 CCNG2Q16589 344 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 CCDC142Q17RM4 750 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 LETM2Q2VYF4 491 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 RWDD4Q6NW29 188 aaKnown RBP7.02□□□□□ -1.29
USP28-207ENST00000538475 TTC27Q6P3X3 843 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 ZNF449Q6P9G9 518 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 DRICH1Q6PGQ1 229 aaPredicted RBP7.02□□□□□ -1.29
USP28-207ENST00000538475 TXNDC11Q6PKC3 985 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 IZUMO2Q6UXV1 221 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 Q6ZNX1 250 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 RNF207Q6ZRF8 634 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 TSHZ1Q6ZSZ6 1077 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 NCCRP1Q6ZVX7 275 aaPredicted RBP7.02□□□□□ -1.29
USP28-207ENST00000538475 STXBP4Q6ZWJ1 553 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 ANO5Q75V66 913 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 MAEAQ7L5Y9 396 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 DYMQ7RTS9 669 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 OTOAQ7RTW8 1153 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 MTDHQ86UE4 582 aaKnown RBP7.02□□□□□ -1.29
USP28-207ENST00000538475 ERI1Q8IV48 349 aaKnown RBP7.02□□□□□ -1.29
USP28-207ENST00000538475 FAM186BQ8IYM0 893 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 OR6Y1Q8NGX8 325 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 OLIG1Q8TAK6 271 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 ERMNQ8TAM6 284 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 FNDC8Q8TC99 324 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 PLEKHO2Q8TD55 490 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 DQX1Q8TE96 717 aaKnown RBP7.02□□□□□ -1.29
USP28-207ENST00000538475 FAM172AQ8WUF8 416 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 SLC35B4Q969S0 331 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 SLC35C1Q96A29 364 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 SGF29Q96ES7 293 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 MPP4Q96JB8 637 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 PRICKLE1Q96MT3 831 aaPredicted RBP7.02□□□□□ -1.29
USP28-207ENST00000538475 PLIN2Q99541 437 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 AGPAT1Q99943 283 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 KLHL4Q9C0H6 718 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 MAF1Q9H063 256 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 ZNF696Q9H7X3 374 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 PLGRKTQ9HBL7 147 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 PALMDQ9NP74 551 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 MAD2L2Q9UI95 211 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 RAB26Q9ULW5 256 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 TELO2Q9Y4R8 837 aa7.02□□□□□ -1.29
USP28-207ENST00000538475 DCCP43146 1447 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 TAF1LQ8IZX4 1826 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 EXOC1LA0A1B0GW35 172 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 hCG_1642624A0A1W2PR95 340 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 RBM47A0AV96 593 aaKnown RBP7.01□□□□□ -1.29
USP28-207ENST00000538475 SMCO2A6NFE2 343 aa7.01□□□□□ -1.29
USP28-207ENST00000538475 TSPY2A6NKD2 308 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms