RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 LCHNA4D1U4 455 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 LINC01553A4QN01 128 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PRRG1O14668 218 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ZNF263O14978 683 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 XPO1O14980 1071 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TUBB4AP04350 444 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CYP2F1P24903 491 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CASQ1P31415 396 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 GPD2P43304 727 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TUFMP49411 452 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 DSG1Q02413 1049 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TAP1Q03518 808 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PDCLQ13371 301 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 GPM6BQ13491 265 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ZNF268Q14587 947 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ODF2Q5BJF6 829 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 HABP4Q5JVS0 413 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ZFYVE27Q5T4F4 411 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CYP4A22Q5TCH4 519 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PLPP4Q5VZY2 271 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PPP2R2DQ66LE6 453 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 FAM171BQ6P995 826 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PALB2Q86YC2 1186 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PHF13Q86YI8 300 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 REXO1L1PQ8IX06 675 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SYCE1Q8N0S2 351 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 FUKQ8N0W3 1084 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RNF10Q8N5U6 811 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SLC35G2Q8TBE7 412 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SPPL2BQ8TCT7 592 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PIK3R5Q8WYR1 880 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ZSWIM1Q9BR11 485 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 C17orf80Q9BSJ5 609 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 NKX2-4Q9H2Z4 354 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CERS4Q9HA82 394 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MTRRQ9UBK8 725 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 REXO2Q9Y3B8 237 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 NME7Q9Y5B8 376 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 BACE2Q9Y5Z0 518 aa11.24□□□□□ -0.61
TNFRSF1A-211ENST00000538363 USP27XA6NNY8 438 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MYO1FO00160 1098 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CAPN9O14815 690 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PJA2O43164 708 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MOCS3O95396 460 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ADH1AP07327 375 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 KRT3P12035 628 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TNNT1P13805 278 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MMP8P22894 467 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RRM1P23921 792 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ALDH1A3P47895 512 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 NDUFV1P49821 464 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 UBE3AQ05086 875 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ADCY1Q08828 1119 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 GPR17Q13304 367 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MRPL58Q14197 206 aaKnown RBP11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MESDQ14696 234 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 VEPH1Q14D04 833 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 C2CD6Q53TS8 623 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 FAM102AQ5T9C2 384 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RASIP1Q5U651 963 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 KIAA0319Q5VV43 1072 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ELMSAN1Q6PJG2 1045 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 DAAM2Q86T65 1068 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PIGZQ86VD9 579 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 LRRTM3Q86VH5 581 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TTC30AQ86WT1 665 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ZNF564Q8TBZ8 553 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 STK32AQ8WU08 396 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 POF1BQ8WVV4 589 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 AUTS2Q8WXX7 1259 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ARNTL2Q8WYA1 636 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RFFLQ8WZ73 363 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CLP1Q92989 425 aaKnown RBP11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 FAM149B1Q96BN6 582 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 FUBP3Q96I24 572 aaKnown RBP eCLIP11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 HSFY1Q96LI6 401 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TCF25Q9BQ70 676 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RTP3Q9BQQ7 232 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SYT11Q9BT88 431 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 LACRTQ9GZZ8 138 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CYP4F11Q9HBI6 524 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TLR9Q9NR96 1032 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TMLHEQ9NVH6 421 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 UVRAGQ9P2Y5 699 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TRIM10Q9UDY6 481 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 DNAI1Q9UI46 699 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SLC27A5Q9Y2P5 690 aa11.23□□□□□ -0.61
TNFRSF1A-211ENST00000538363 A0A0A6YYK5 440 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 E5RJQ4 531 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 F8VP50 259 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SART1O43290 800 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 FBXO21O94952 628 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CTSAP10619 480 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CDH5P33151 784 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TKTL1P51854 596 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ADIGQ0VDE8 80 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 EFHC1Q5JVL4 640 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TPGS2Q68CL5 300 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PMF1Q6P1K2 205 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 VSTM1Q6UX27 236 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms