RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 BLIDQ8IZY5 108 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 LSMEM1Q8N8F7 131 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 TOR1AIP2Q8NFQ8 470 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 NEDD1Q8NHV4 660 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 ANGPTL6Q8NI99 470 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 LRRC15Q8TF66 581 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 NLRP7Q8WX94 980 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 FAR2Q96K12 515 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 EGLN2Q96KS0 407 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 MROQ9BYG7 248 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 SLC38A10Q9HBR0 1119 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 LRRC4BQ9NT99 713 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 SACM1LQ9NTJ5 587 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 THAP1Q9NVV9 213 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 PSMC3IPQ9P2W1 217 aaPredicted RBP8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 GOLGA8QA0A0J9YX86 632 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 MYOCOSA0A1B0GUC4 107 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 ILVBLA1L0T0 632 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 PLEKHG3A1L390 1219 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 GOLGA8OA6NCC3 632 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 ZNF839A8K0R7 811 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 GOLGA8NF8WBI6 632 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 GOLGA8RI6L899 631 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 AP3B1O00203 1094 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 CDK2AP1O14519 115 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 CLOCKO15516 846 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 TSPAN1O60635 241 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 ICMTO60725 284 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 PLS3P13797 630 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 TATP17735 454 aaPredicted RBP8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 DDX5P17844 614 aaKnown RBP8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 EPHA7Q15375 998 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 LSM12Q3MHD2 195 aaKnown RBP8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 LRRC24Q50LG9 513 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 POTEAQ6S8J7 498 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 XKR5Q6UX68 686 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 ANKS1BQ7Z6G8 1248 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 CHSY1Q86X52 802 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 ZNF34Q8IZ26 560 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 CADM3Q8N126 398 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 LARGE2Q8N3Y3 721 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 ZNF276Q8N554 614 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 TMA16Q96EY4 203 aaKnown RBP8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 C7orf26Q96N11 449 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 NUDT12Q9BQG2 462 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 C1orf50Q9BV19 199 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 DCLK3Q9C098 648 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 C12orf10Q9HB07 376 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 AS3MTQ9HBK9 375 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 XAB2Q9HCS7 855 aaKnown RBP8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 CCDC177Q9NQR7 707 aaPredicted RBP8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 GINM1Q9NU53 330 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 TBC1D14Q9P2M4 693 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 EBF1Q9UH73 591 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 KIAA1257Q9ULG3 409 aa8.88□□□□□ -0.99
SRGAP1-202ENST00000537556 UBR1Q8IWV7 1749 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 DCAF8L1A6NGE4 600 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 SLC22A1O15245 554 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 CPOXP36551 454 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 CASP5P51878 434 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 MRPS9P82933 396 aaKnown RBP8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 HSPA14Q0VDF9 509 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 CRY1Q16526 586 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 DGKDQ16760 1214 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 PGM2L1Q6PCE3 622 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 EEPD1Q7L9B9 569 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 DCP2Q8IU60 420 aaKnown RBP8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 HIPK4Q8NE63 616 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 SLC30A5Q8TAD4 765 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 HCAR2Q8TDS4 363 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 KRT35Q92764 455 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 ZBED2Q9BTP6 218 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 SLC2A11Q9BYW1 496 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 BCAP29Q9UHQ4 241 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 POMPQ9Y244 141 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 TNKSO95271 1327 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 ZNF532Q9HCE3 1301 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 C10orf71Q711Q0 1435 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 CCDC88AQ3V6T2 1871 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 ZSCAN5BA6NJL1 495 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 AREL1O15033 823 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 FOXD2O60548 495 aaPredicted RBP8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 NOL3O60936 208 aaKnown RBP8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 PLEKHA8P1O95397 391 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 ACTN1P12814 892 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 SLC9A1P19634 815 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 ACAT1P24752 427 aaKnown RBP8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 IVDP26440 423 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 GCAP28676 217 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 HOXC9P31274 260 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 CDK18Q07002 472 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 SCARF1Q14162 830 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 CDONQ4KMG0 1287 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 MDH1BQ5I0G3 518 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 C6orf52Q5T4I8 152 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 KRT80Q6KB66 452 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 PPP4R4Q6NUP7 873 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 ZFP1Q6P2D0 407 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms