RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 GPS1Q13098 491 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 SMTNL2Q2TAL5 461 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 UBA3Q8TBC4 463 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 SLC35F5Q8WV83 523 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 TEKT4Q8WW24 435 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 KHSRPQ92945 711 aaKnown RBP eCLIP9.76□□□□□ -0.85
UBE3B-207ENST00000537063 PIWIL1Q96J94 861 aaKnown RBP9.76□□□□□ -0.85
UBE3B-207ENST00000537063 TMEM121Q9BTD3 319 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 RSAD1Q9HA92 442 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 FLRT1Q9NZU1 646 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 CLEC11AQ9Y240 323 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 PIRO00625 290 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 TRIM66O15016 1216 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 CST8O60676 142 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 SCNN1AP37088 669 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 MFSD10Q14728 455 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 KCNT1Q5JUK3 1230 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 C9orf57Q5W0N0 161 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 OLFML2BQ68BL8 750 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 ARCQ7LC44 396 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 PCGF5Q86SE9 256 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 C11orf84Q9BUA3 381 aaPredicted RBP9.76□□□□□ -0.85
UBE3B-207ENST00000537063 Q9Y3F1 56 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 DOCK3Q8IZD9 2030 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.76□□□□□ -0.85
UBE3B-207ENST00000537063 E7ESA3 106 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 SMAPO00193 183 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 CDH16O75309 829 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 GABBR2O75899 941 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 KCNE1P15382 129 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 GDF10P55107 478 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 TAF5Q15542 800 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 PPP1R26Q5T8A7 1209 aaPredicted RBP9.76□□□□□ -0.85
UBE3B-207ENST00000537063 CATSPER4Q7RTX7 472 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 ZDHHC17Q8IUH5 632 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 C2orf69Q8N8R5 385 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 NAT8LQ8N9F0 302 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 BEST2Q8NFU1 509 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 CFAP57Q96MR6 1250 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 SELENOSQ9BQE4 189 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 PPCSQ9HAB8 311 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 CYLDQ9NQC7 956 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 DNAJC17Q9NVM6 304 aaKnown RBP9.76□□□□□ -0.85
UBE3B-207ENST00000537063 GDAP2Q9NXN4 497 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 CTNNAL1Q9UBT7 734 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 TRIP12Q14669 1992 aaPredicted RBP9.75□□□□□ -0.85
UBE3B-207ENST00000537063 A0A087WUV0 522 aaPredicted RBP9.75□□□□□ -0.85
UBE3B-207ENST00000537063 RNF8O76064 485 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 NOMO1Q15155 1222 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 CCDC14Q49A88 953 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 UBXN11Q5T124 520 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 ZFYVE27Q5T4F4 411 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 TLK2Q86UE8 772 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 C12orf29Q8N999 325 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 KBTBD7Q8WVZ9 684 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 RXFP2Q8WXD0 754 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 MAML1Q92585 1016 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 ARHGEF2Q92974 986 aaKnown RBP9.75□□□□□ -0.85
UBE3B-207ENST00000537063 HAUS1Q96CS2 278 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 FETUBQ9UGM5 382 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 ZMYND8Q9ULU4 1186 aaPredicted RBP9.75□□□□□ -0.85
UBE3B-207ENST00000537063 UBQLN1Q9UMX0 589 aaKnown RBP9.75□□□□□ -0.85
UBE3B-207ENST00000537063 COL4A4P53420 1690 aaPredicted RBP9.75□□□□□ -0.85
UBE3B-207ENST00000537063 TSC2P49815 1807 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 YARSP54577 528 aaKnown RBP9.75□□□□□ -0.85
UBE3B-207ENST00000537063 DPYSL3Q14195 570 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 SNX17Q15036 470 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 SKIDA1Q1XH10 827 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 SOWAHAQ2M3V2 549 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 PMF1Q6P1K2 205 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 PIGWQ7Z7B1 504 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 SESTD1Q86VW0 696 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 PPIL6Q8IXY8 311 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 CYP4X1Q8N118 509 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 CRYBG2Q8N1P7 616 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 KCTD6Q8NC69 237 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 TMEM40Q8WWA1 233 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 CPT1BQ92523 772 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 C18orf25Q96B23 403 aaPredicted RBP9.75□□□□□ -0.85
UBE3B-207ENST00000537063 FAF2Q96CS3 445 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 RTP4Q96DX8 246 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 SEC16BQ96JE7 1060 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 C9orf72Q96LT7 481 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 OSMRQ99650 979 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 NXF3Q9H4D5 531 aaKnown RBP9.75□□□□□ -0.85
UBE3B-207ENST00000537063 INTS9Q9NV88 658 aaKnown RBP9.75□□□□□ -0.85
UBE3B-207ENST00000537063 SGK1O00141 431 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 DYNC1LI2O43237 492 aaPredicted RBP9.75□□□□□ -0.85
UBE3B-207ENST00000537063 RECQL4O94761 1208 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 CYP2C9P11712 490 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 PSEN2P49810 448 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 SLC6A3Q01959 620 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 SH3PXD2AQ5TCZ1 1133 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 TBCBQ99426 244 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 FAM49AQ9H0Q0 323 aaPredicted RBP9.75□□□□□ -0.85
UBE3B-207ENST00000537063 SAYSD1Q9NPB0 183 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 SAE1Q9UBE0 346 aaPredicted RBP9.75□□□□□ -0.85
UBE3B-207ENST00000537063 GTF2IRD1Q9UHL9 959 aa9.75□□□□□ -0.85
UBE3B-207ENST00000537063 CELF2O95319 508 aaKnown RBP9.74□□□□□ -0.85
UBE3B-207ENST00000537063 RPL22P35268 128 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms