RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ZMYM2Q9UBW7 1377 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 RABGEF1Q9UJ41 708 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 NAALADL1Q9UQQ1 740 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 TMEM98Q9Y2Y6 226 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 TESPA1A2RU30 521 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 SIGLEC16A6NMB1 481 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 DENRO43583 198 aaKnown RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 SRP72O76094 671 aaKnown RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ANPEPP15144 967 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 RPL21P46778 160 aaKnown RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 YWHAHQ04917 246 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ITKQ08881 620 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 SLFN13Q68D06 897 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 CLVS1Q8IUQ0 354 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ZC3H15Q8WU90 426 aaKnown RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ZFYVE19Q96K21 471 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ZBED2Q9BTP6 218 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 RNPEPQ9H4A4 650 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 MAGEE1Q9HCI5 957 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 MYO3BQ8WXR4 1341 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 LOC102724428A0A0B4J2F2 783 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 TMEM191BP0C7N4 346 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 SIK1P57059 783 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ZNF394Q53GI3 561 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 DHRS4L2Q6PKH6 230 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 UTS2BQ765I0 119 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 CYP2U1Q7Z449 544 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 PLD3Q8IV08 490 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 RIN3Q8TB24 985 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 OXNAD1Q96HP4 312 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 SEMA6BQ9H3T3 888 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 KMT5AQ9NQR1 393 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 QPCTLQ9NXS2 382 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 CNOT11Q9UKZ1 510 aaKnown RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 RPTORQ8N122 1335 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 FCHO1O14526 889 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ALAS1P13196 640 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 CYP11B2P19099 503 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 IL10P22301 178 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 HOXA13P31271 388 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 CASP7P55210 303 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ROR1Q01973 937 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 SYDE2Q5VT97 1194 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 HAUS6Q7Z4H7 955 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 CCNJLQ8IV13 435 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 COLGALT2Q8IYK4 626 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ZNF420Q8TAQ5 688 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 SNX27Q96L92 541 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 CSRNP1Q96S65 589 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 CORO1BQ9BR76 489 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 EMSYQ7Z589 1322 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 A0A0J9YVX5 310 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 KANSL1LA0AUZ9 987 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ARHGEF37A1IGU5 675 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 SNAP23O00161 211 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 KPNA4O00629 521 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 TBX10O75333 385 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 KRT6CP48668 564 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 C21orf59P57076 290 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 RTP1P59025 263 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 GRM4Q14833 912 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 PDIA6Q15084 440 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 SLC15A2Q16348 729 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ZNF423Q2M1K9 1284 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ASPRV1Q53RT3 343 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 LMBRD2Q68DH5 695 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 VSTM1Q6UX27 236 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ZNF571Q7Z3V5 609 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ANKS1BQ7Z6G8 1248 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 TRABD2AQ86V40 505 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 PYDC1Q8WXC3 89 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 CPA5Q8WXQ8 436 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 USP13Q92995 863 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 EURLQ9NYK6 297 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 TMEM9Q9P0T7 183 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 NKX1-2Q9UD57 310 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 HEY1Q9Y5J3 304 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 SNX13Q9Y5W8 968 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 M0R3G1 203 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 NMT1P30419 496 aaKnown RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 TROAPQ12815 778 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 CDC16Q13042 620 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 SEC23AQ15436 765 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 DALRD3Q5D0E6 543 aaKnown RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 TCHHL1Q5QJ38 904 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 TMEM270Q6UE05 265 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 Q6ZNX1 250 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ZC3H3Q8IXZ2 948 aaKnown RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ADCY4Q8NFM4 1077 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 GIPC2Q8TF65 315 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 OMA1Q96E52 524 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 PRPF18Q99633 342 aaKnown RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ZNF839A8K0R7 811 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 MAP3K7CLP57077 242 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 ZNF200P98182 395 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 PPP6R3Q5H9R7 873 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 FAM182BQ5T319 152 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 C10orf82Q8WW14 230 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 NACC1Q96RE7 527 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms