RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 DENND5BQ6ZUT9 1274 aa19.01■□□□□ 0.63
TNFRSF1A-209ENST00000536717 MON1AQ86VX9 555 aa19.01■□□□□ 0.63
TNFRSF1A-209ENST00000536717 BPIFB1Q8TDL5 484 aa19.01■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TAS1R2Q8TE23 839 aa19.01■□□□□ 0.63
TNFRSF1A-209ENST00000536717 NELFBQ8WX92 580 aa19.01■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ZFYVE19Q96K21 471 aa19.01■□□□□ 0.63
TNFRSF1A-209ENST00000536717 CEP295NLQ96MC4 621 aa19.01■□□□□ 0.63
TNFRSF1A-209ENST00000536717 CTNND2Q9UQB3 1225 aa19.01■□□□□ 0.63
TNFRSF1A-209ENST00000536717 RIF1Q5UIP0 2472 aaKnown RBP19.01■□□□□ 0.63
TNFRSF1A-209ENST00000536717 MYO16Q9Y6X6 1858 aa19.01■□□□□ 0.63
TNFRSF1A-209ENST00000536717 SYCE3A1L190 88 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TRIM49BA6NDI0 452 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 CLDN5O00501 218 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TRIM66O15016 1216 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 CETN3O15182 167 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 P4HA1P13674 534 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 AVPR1AP37288 418 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 MRE11P49959 708 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 FZD5Q13467 585 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ANKRD40Q6AI12 368 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ZNF852Q6ZMS4 543 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ZC3H3Q8IXZ2 948 aaKnown RBP19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ZNF687Q8N1G0 1237 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 CELF5Q8N6W0 485 aaKnown RBP19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 USP13Q92995 863 aaPredicted RBP19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 C8orf48Q96LL4 319 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 BCO2Q9BYV7 579 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ELOVL4Q9GZR5 314 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 MMRN2Q9H8L6 949 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 APOBEC3GQ9HC16 384 aaKnown RBP19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TMEM8AQ9HCN3 771 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 HMGXB4Q9UGU5 601 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 PIAS3Q9Y6X2 628 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ZFHX2Q9C0A1 2572 aaPredicted RBP19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 CCDC192P0DO97 292 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ANXA13P27216 316 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 NOP14P78316 857 aaKnown RBP19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TYRO3Q06418 890 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ZSCAN23Q3MJ62 389 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ARHGAP29Q52LW3 1261 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 CT47A1Q5JQC4 288 aaPredicted RBP19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 PAQR9Q6ZVX9 377 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 RIN3Q8TB24 985 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 SLC22A12Q96S37 553 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 NELL2Q99435 816 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TTLL2Q9BWV7 592 aa19■□□□□ 0.63
TNFRSF1A-209ENST00000536717 FAM186AA6NE01 2351 aa18.99■□□□□ 0.63
TNFRSF1A-209ENST00000536717 MYOFQ9NZM1 2061 aa18.99■□□□□ 0.63
TNFRSF1A-209ENST00000536717 MAN2B1O00754 1011 aa18.99■□□□□ 0.63
TNFRSF1A-209ENST00000536717 EPB41P11171 864 aaKnown RBP18.99■□□□□ 0.63
TNFRSF1A-209ENST00000536717 KRT39Q6A163 491 aa18.99■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ACOT1Q86TX2 421 aa18.99■□□□□ 0.63
TNFRSF1A-209ENST00000536717 CSGALNACT1Q8TDX6 532 aa18.99■□□□□ 0.63
TNFRSF1A-209ENST00000536717 CLDN23Q96B33 292 aa18.99■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TNIP3Q96KP6 325 aa18.99■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TDP1Q9NUW8 608 aa18.99■□□□□ 0.63
TNFRSF1A-209ENST00000536717 GTSE1Q9NYZ3 720 aa18.99■□□□□ 0.63
TNFRSF1A-209ENST00000536717 RWDD2AQ9UIY3 292 aa18.99■□□□□ 0.63
TNFRSF1A-209ENST00000536717 MRPS17Q9Y2R5 130 aaKnown RBP18.99■□□□□ 0.63
TNFRSF1A-209ENST00000536717 PTPRZ1P23471 2315 aaPredicted RBP18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 C2orf78A6NCI8 922 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 GTF2H1P32780 548 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 SOX9P48436 509 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 NDST1P52848 882 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 MLLT6P55198 1093 aaPredicted RBP18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 STX17P56962 302 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 FKBP3Q00688 224 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ORC1Q13415 861 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 FOXR2Q6PJQ5 311 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 FAM35AQ86V20 835 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 UNC93AQ86WB7 457 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 C1orf210Q8IVY1 113 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 FUKQ8N0W3 1084 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 CRYBG2Q8N1P7 616 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 FAM3CQ92520 227 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 CYP2S1Q96SQ9 504 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 IMPG2Q9BZV3 1241 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 KIF9Q9HAQ2 790 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TRPC7Q9HCX4 862 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 GCNT4Q9P109 453 aa18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 NDRG2Q9UN36 371 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ERCC5P28715 1186 aaPredicted RBP18.97■□□□□ 0.63
TNFRSF1A-209ENST00000536717 NBL1P41271 181 aa18.97■□□□□ 0.63
TNFRSF1A-209ENST00000536717 MXI1P50539 228 aa18.97■□□□□ 0.63
TNFRSF1A-209ENST00000536717 PLCB2Q00722 1185 aa18.97■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TNK2Q07912 1038 aa18.97■□□□□ 0.63
TNFRSF1A-209ENST00000536717 INCA1Q0VD86 236 aa18.97■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ZNF268Q14587 947 aaPredicted RBP18.97■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TTI2Q6NXR4 508 aa18.97■□□□□ 0.63
TNFRSF1A-209ENST00000536717 SEMA4DQ92854 862 aa18.97■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TWNKQ96RR1 684 aa18.97■□□□□ 0.63
TNFRSF1A-209ENST00000536717 KCNK16Q96T55 309 aa18.97■□□□□ 0.63
TNFRSF1A-209ENST00000536717 FAM83CQ9BQN1 747 aa18.97■□□□□ 0.63
TNFRSF1A-209ENST00000536717 NCAM2O15394 837 aa18.96■□□□□ 0.63
TNFRSF1A-209ENST00000536717 SLC16A3O15427 465 aaKnown RBP18.96■□□□□ 0.63
TNFRSF1A-209ENST00000536717 CCDC130P13994 396 aa18.96■□□□□ 0.63
TNFRSF1A-209ENST00000536717 MAGEA9P43362 315 aa18.96■□□□□ 0.63
TNFRSF1A-209ENST00000536717 RPS9P46781 194 aaKnown RBP18.96■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TXNDC11Q6PKC3 985 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms