RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 A0A087X1B8 175 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 PIPSLA2A3N6 862 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 RAMP2O60895 175 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 FOSP01100 380 aaPredicted RBP6.76□□□□□ -1.33
CLIP1-207ENST00000536634 ITGAMP11215 1152 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 MAP2K6P52564 334 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 MXRA7P84157 204 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 SPDYE7PQ495Y7 208 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 SULT6B1Q6IMI4 303 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 ARMC6Q6NXE6 501 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 FOXR2Q6PJQ5 311 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.76□□□□□ -1.33
CLIP1-207ENST00000536634 Q8NA96 180 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 AGAP2Q99490 1192 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 NUP88Q99567 741 aaPredicted RBP6.76□□□□□ -1.33
CLIP1-207ENST00000536634 C1orf43Q9BWL3 253 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 SYBUQ9NX95 663 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 DMRT1Q9Y5R6 373 aa6.76□□□□□ -1.33
CLIP1-207ENST00000536634 ERN1O75460 977 aaKnown RBP6.75□□□□□ -1.33
CLIP1-207ENST00000536634 FTLP02792 175 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-207ENST00000536634 EGR2P11161 476 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-207ENST00000536634 PROZP22891 400 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 AKAP5P24588 427 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 SMARCA1P28370 1054 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 HK3P52790 923 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 SOX10P56693 466 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 ZNF267Q14586 743 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-207ENST00000536634 GEN1Q17RS7 908 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 PGS1Q32NB8 556 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 PLEKHG6Q3KR16 790 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 CCDC93Q567U6 631 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 HECTD2Q5U5R9 776 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 HEATR3Q7Z4Q2 680 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 FAM43AQ8N2R8 423 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 CNBD1Q8NA66 436 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 JPH3Q8WXH2 748 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-207ENST00000536634 MVB12AQ96EY5 273 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 MASTLQ96GX5 879 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 BOD1Q96IK1 185 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 GALNT9Q9HCQ5 603 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 MAN1C1Q9NR34 630 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 TMEM74BQ9NUR3 256 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 ZNF180Q9UJW8 692 aa6.75□□□□□ -1.33
CLIP1-207ENST00000536634 PRSS29PA6NIE9 313 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 E9PLN8 166 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 RNMTO43148 476 aaKnown RBP6.74□□□□□ -1.33
CLIP1-207ENST00000536634 CAMTA2O94983 1202 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 CT47B1P0C2W7 299 aaPredicted RBP6.74□□□□□ -1.33
CLIP1-207ENST00000536634 PRDX5P30044 214 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 EPS15P42566 896 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 COL10A1Q03692 680 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 ODR4Q5SWX8 454 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 FAM90A1Q86YD7 464 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 LCORLQ8N3X6 602 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 PDPRQ8NCN5 879 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 NSUN7Q8NE18 718 aaKnown RBP6.74□□□□□ -1.33
CLIP1-207ENST00000536634 GPR150Q8NGU9 434 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 HPS3Q969F9 1004 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 FUBP1Q96AE4 644 aaKnown RBP6.74□□□□□ -1.33
CLIP1-207ENST00000536634 MED15Q96RN5 788 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 VKORC1Q9BQB6 163 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 IMPG2Q9BZV3 1241 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 UNKLQ9H9P5 680 aaKnown RBP6.74□□□□□ -1.33
CLIP1-207ENST00000536634 CYP4F11Q9HBI6 524 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 ABCF2Q9UG63 623 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 POLHQ9Y253 713 aa6.74□□□□□ -1.33
CLIP1-207ENST00000536634 VCANP13611 3396 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 CUL9Q8IWT3 2517 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 SIPA1L3O60292 1781 aaPredicted RBP6.73□□□□□ -1.33
CLIP1-207ENST00000536634 SLC16A6O15403 523 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 VCAM1P19320 739 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 MAP2K2P36507 400 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 VAV2P52735 878 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 ATAT1Q5SQI0 421 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 ABHD17BQ5VST6 288 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 TPH2Q8IWU9 490 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 GRAMD1CQ8IYS0 662 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 GPC2Q8N158 579 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 SLC17A8Q8NDX2 589 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 LINC00476Q8WZB0 136 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 LRIG1Q96JA1 1093 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 CDH19Q9H159 772 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 SLAMF7Q9NQ25 335 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 SIDT1Q9NXL6 827 aaKnown RBP6.73□□□□□ -1.33
CLIP1-207ENST00000536634 CTTNBP2NLQ9P2B4 639 aa6.73□□□□□ -1.33
CLIP1-207ENST00000536634 EPN1Q9Y6I3 576 aaPredicted RBP6.73□□□□□ -1.33
CLIP1-207ENST00000536634 E2F8A0AVK6 867 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 NPHP1O15259 732 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 CA12O43570 354 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 STARD3NLO95772 234 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 A1BGP04217 495 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 GJB1P08034 283 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 NPR1P16066 1061 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 PHKA1P46020 1223 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 PIP4K2AP48426 406 aaPredicted RBP6.72□□□□□ -1.33
CLIP1-207ENST00000536634 EPHB1P54762 984 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 PSMC1P62191 440 aaKnown RBP6.72□□□□□ -1.33
CLIP1-207ENST00000536634 FOXI1Q12951 378 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 IFIT1BQ5T764 474 aaKnown RBP6.72□□□□□ -1.33
CLIP1-207ENST00000536634 THEMIS2Q5TEJ8 643 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms