RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 ZMYM5Q9UJ78 669 aa9.44□□□□□ -0.9
CHD4-204ENST00000535810 MAGED2Q9UNF1 606 aaPredicted RBP9.44□□□□□ -0.9
CHD4-204ENST00000535810 FRMD4BQ9Y2L6 1034 aa9.44□□□□□ -0.9
CHD4-204ENST00000535810 NUP210Q8TEM1 1887 aaPredicted RBP9.44□□□□□ -0.9
CHD4-204ENST00000535810 FRYLO94915 3013 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 PTPRDP23468 1912 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 FAM170BA6NMN3 283 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 SLC38A8A6NNN8 435 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 IKBKBO14920 756 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 ZNF263O14978 683 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 CHADO15335 359 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 CLSTN1O94985 981 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 TRIM49P0CI25 452 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 TRIM49CP0CI26 452 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 BDNFP23560 247 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 DDX6P26196 483 aaKnown RBP eCLIP9.43□□□□□ -0.9
CHD4-204ENST00000535810 RPL13P26373 211 aaKnown RBP9.43□□□□□ -0.9
CHD4-204ENST00000535810 TARSP26639 723 aaKnown RBP9.43□□□□□ -0.9
CHD4-204ENST00000535810 RAP1GAPP47736 663 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 VAMP7P51809 220 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 EDRF1Q3B7T1 1238 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 ZNF667Q5HYK9 610 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 LCE2DQ5TA82 110 aaPredicted RBP9.43□□□□□ -0.9
CHD4-204ENST00000535810 TXNDC8Q6A555 127 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 VSTM1Q6UX27 236 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 SCARA5Q6ZMJ2 495 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 ZNF852Q6ZMS4 543 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 INTS8Q75QN2 995 aaKnown RBP9.43□□□□□ -0.9
CHD4-204ENST00000535810 SV2AQ7L0J3 742 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 SCN4BQ8IWT1 228 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 YAF2Q8IY57 180 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 CMTM8Q8IZV2 173 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 ZNF687Q8N1G0 1237 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 B3GALNT2Q8NCR0 500 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 SPATA20Q8TB22 786 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 ELMO3Q96BJ8 720 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 RMDN1Q96DB5 314 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 CNTNAP3BQ96NU0 1288 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 HS3ST6Q96QI5 342 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 CNTNAP3Q9BZ76 1288 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 OSBPL6Q9BZF3 934 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 RMND1Q9NWS8 449 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 MAGEC2Q9UBF1 373 aaPredicted RBP9.43□□□□□ -0.9
CHD4-204ENST00000535810 UXTQ9UBK9 157 aaPredicted RBP9.43□□□□□ -0.9
CHD4-204ENST00000535810 PIAS3Q9Y6X2 628 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 MIA3Q5JRA6 1907 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 TICRRQ7Z2Z1 1910 aa9.43□□□□□ -0.9
CHD4-204ENST00000535810 OBSL1O75147 1896 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 ATRXP46100 2492 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 GPR179Q6PRD1 2367 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 SOBPA7XYQ1 873 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 A8MXQ7 604 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 MAN2B1O00754 1011 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 ASS1P00966 412 aaKnown RBP9.42□□□□□ -0.9
CHD4-204ENST00000535810 PTPN1P18031 435 aaKnown RBP9.42□□□□□ -0.9
CHD4-204ENST00000535810 PSMC2P35998 433 aaKnown RBP9.42□□□□□ -0.9
CHD4-204ENST00000535810 AVPR1AP37288 418 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 GRIK1P39086 918 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 PIK3CAP42336 1068 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 ASPAP45381 313 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 GCLMP48507 274 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 CACNA2D1P54289 1103 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 CDH8P55286 799 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 ENPEPQ07075 957 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 PPP3CAQ08209 521 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 ADAM9Q13443 819 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 PUM1Q14671 1186 aaKnown RBP eCLIP9.42□□□□□ -0.9
CHD4-204ENST00000535810 SGSM1Q2NKQ1 1148 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 COBLL1Q53SF7 1204 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 ZNF658Q5TYW1 1059 aaPredicted RBP9.42□□□□□ -0.9
CHD4-204ENST00000535810 MON1AQ86VX9 555 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 FAM186BQ8IYM0 893 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 CELF5Q8N6W0 485 aaKnown RBP9.42□□□□□ -0.9
CHD4-204ENST00000535810 MAB21L3Q8N8X9 362 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 MRPS31Q92665 395 aaKnown RBP9.42□□□□□ -0.9
CHD4-204ENST00000535810 TAF4BQ92750 862 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 ERCC4Q92889 916 aaPredicted RBP9.42□□□□□ -0.9
CHD4-204ENST00000535810 USP13Q92995 863 aaPredicted RBP9.42□□□□□ -0.9
CHD4-204ENST00000535810 CLDN23Q96B33 292 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 EEF2KMTQ96G04 330 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 ZFYVE19Q96K21 471 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 SPATA17Q96L03 361 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 CEP295NLQ96MC4 621 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 TIGD1Q96MW7 591 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 GSDMAQ96QA5 445 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 BCO2Q9BYV7 579 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 ZNF518BQ9C0D4 1074 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 ELOVL4Q9GZR5 314 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 SDCBP2Q9H190 292 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 TMEM30AQ9NV96 361 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 CCL26Q9Y258 94 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 MRPS17Q9Y2R5 130 aaKnown RBP9.42□□□□□ -0.9
CHD4-204ENST00000535810 DENND4CQ5VZ89 1909 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 BAHCC1Q9P281 2608 aa9.42□□□□□ -0.9
CHD4-204ENST00000535810 KIF26AQ9ULI4 1882 aaPredicted RBP9.41□□□□□ -0.9
CHD4-204ENST00000535810 F8VP50 259 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 SMC2O95347 1197 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 HLA-DRAP01903 254 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 KRT13P13646 458 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 P4HA1P13674 534 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms