RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 GALNT9Q9HCQ5 603 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 TERF2IPQ9NYB0 399 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 SRRDQ9UH36 339 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 KCNE5Q9UJ90 142 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 PCDHA6Q9UN73 950 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 SORCS3Q9UPU3 1222 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 TSC22D4Q9Y3Q8 395 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 ITGB4P16144 1822 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 VIRMAQ69YN4 1812 aaKnown RBP3.93□□□□□ -1.78
SNHG1-202ENST00000535689 ADGRB1O14514 1584 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 PCDH11XQ9BZA7 1347 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 PCDH11YQ9BZA8 1340 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 BRCA1P38398 1863 aaKnown RBP3.92□□□□□ -1.78
SNHG1-202ENST00000535689 NSD2O96028 1365 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 CNTNAP1P78357 1384 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 CDHR4A6H8M9 788 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 ZNF785A8K8V0 405 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 HNRNPDLO14979 420 aaKnown RBP3.92□□□□□ -1.78
SNHG1-202ENST00000535689 CCP110O43303 1012 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 FOXD2O60548 495 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-202ENST00000535689 EIF3JO75822 258 aaKnown RBP3.92□□□□□ -1.78
SNHG1-202ENST00000535689 STC2O76061 302 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 ITGB1P05556 798 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 GRPP07492 148 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 MAP2K2P36507 400 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 CHN2P52757 468 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 RABGGTBP53611 331 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 SUMO3P55854 103 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-202ENST00000535689 FPGSQ05932 587 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 GRM1Q13255 1194 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 RRP1BQ14684 758 aaKnown RBP3.92□□□□□ -1.78
SNHG1-202ENST00000535689 TEDDM1Q5T9Z0 273 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 AGAP9Q5VTM2 703 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 ANKS6Q68DC2 871 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 USP17L6PQ6QN14 398 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 C1orf210Q8IVY1 113 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 FBXO18Q8NFZ0 1043 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 HAS1Q92839 578 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 C20orf173Q96LM9 149 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 CCDC138Q96M89 665 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 PPP1R9BQ96SB3 815 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 LRFN3Q9BTN0 628 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 TRIM54Q9BYV2 358 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 FAM83DQ9H4H8 585 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 ZMAT3Q9HA38 289 aaKnown RBP3.92□□□□□ -1.78
SNHG1-202ENST00000535689 KLHL11Q9NVR0 708 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 TRPM5Q9NZQ8 1165 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-202ENST00000535689 DDX20Q9UHI6 824 aaKnown RBP3.92□□□□□ -1.78
SNHG1-202ENST00000535689 SLC23A1Q9UHI7 598 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 USP15Q9Y4E8 981 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-202ENST00000535689 RAD54BQ9Y620 910 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 SCN4AP35499 1836 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 C4BP0C0L5 1744 aa3.92□□□□□ -1.78
SNHG1-202ENST00000535689 TNRC18O15417 2968 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-202ENST00000535689 PALLDQ8WX93 1383 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 KCPQ6ZWJ8 1503 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 USP54Q70EL1 1684 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 CASP8AP2Q9UKL3 1982 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 A0A0G2JLL6 359 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-202ENST00000535689 A0A1B0GTW7 788 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 AQP7P3A6NL99 342 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 H0YIN7 160 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 BTN3A1O00481 513 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 TOR1BO14657 336 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 PMM2O15305 246 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 RPS6KA4O75676 772 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 MATN4O95460 622 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 PARP1P09874 1014 aaKnown RBP3.91□□□□□ -1.78
SNHG1-202ENST00000535689 KITP10721 976 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 KCNA2P16389 499 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 KLRC1P26715 233 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 AVPR1BP47901 424 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 ZNF135P52742 658 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-202ENST00000535689 LOXL3P58215 753 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 PSMC1P62191 440 aaKnown RBP3.91□□□□□ -1.78
SNHG1-202ENST00000535689 DAG1Q14118 895 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 ICAM4Q14773 271 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 MAP9Q49MG5 647 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 TIGD2Q4W5G0 525 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 LY6G5CQ5SRR4 150 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 TMEM63BQ5T3F8 832 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 ZNF585AQ6P3V2 769 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 RINLQ6ZS11 566 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 USP51Q70EK9 711 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 SMG6Q86US8 1419 aaKnown RBP3.91□□□□□ -1.78
SNHG1-202ENST00000535689 MAPKAPK5Q8IW41 473 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 DCBLD1Q8N8Z6 715 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 OR56A1Q8NGH5 318 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 CPT1CQ8TCG5 803 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 SNX19Q92543 992 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 SLC9A6Q92581 669 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 GJA10Q969M2 543 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 TRIM63Q969Q1 353 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 TIFAQ96CG3 184 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 IQCDQ96DY2 449 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 COG3Q96JB2 828 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 ZNF668Q96K58 619 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-202ENST00000535689 TRIB1Q96RU8 372 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 RPS6KC1Q96S38 1066 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms