RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 GPC5P78333 572 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 MAN2A1Q16706 1144 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 SNX30Q5VWJ9 437 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 ARHGAP17Q68EM7 881 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 HFE2Q6ZVN8 426 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 ENOSF1Q7L5Y1 443 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 FBXL6Q8N531 539 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 CELF5Q8N6W0 485 aaKnown RBP13.69□□□□□ -0.22
CCS-209ENST00000534763 KIAA1958Q8N8K9 716 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 SLC4A11Q8NBS3 891 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 PBXIP1Q96AQ6 731 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 HEXIM2Q96MH2 286 aaKnown RBP13.69□□□□□ -0.22
CCS-209ENST00000534763 SLITRK1Q96PX8 696 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 KCNK16Q96T55 309 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 SMOQ99835 787 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 ARID3AQ99856 593 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 TRMT61BQ9BVS5 477 aaKnown RBP13.69□□□□□ -0.22
CCS-209ENST00000534763 UBXN6Q9BZV1 441 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 SMOC2Q9H3U7 446 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 KRT82Q9NSB4 513 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 TRPM5Q9NZQ8 1165 aa13.69□□□□□ -0.22
CCS-209ENST00000534763 ZNF840PA6NDX5 716 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 HEPACAM2A8MVW5 462 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 PAEPP09466 180 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 CCDC130P13994 396 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 TCF3P15923 654 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 YWHAQP27348 245 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 AVPR1AP37288 418 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 CLCN5P51795 746 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 NUBP1P53384 320 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 USP46P62068 366 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 CYP4F8P98187 520 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 PRKCQQ04759 706 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 ORC1Q13415 861 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 STX1AQ16623 288 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 STXBP5Q5T5C0 1151 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 PHLDB3Q6NSJ2 640 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 VITQ6UXI7 678 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 PPM1KQ8N3J5 372 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 ZMIZ2Q8NF64 920 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 IRF7Q92985 503 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 SHDQ96IW2 340 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 DUSP16Q9BY84 665 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 PLA2G2FQ9BZM2 168 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 INTS2Q9H0H0 1204 aaKnown RBP13.68□□□□□ -0.22
CCS-209ENST00000534763 KCNH6Q9H252 994 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 FBXO44Q9H4M3 255 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 FAM49BQ9NUQ9 324 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 TDP1Q9NUW8 608 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 FBXL21Q9UKT6 434 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 CNTN6Q9UQ52 1028 aa13.68□□□□□ -0.22
CCS-209ENST00000534763 ARIH1Q9Y4X5 557 aaPredicted RBP13.68□□□□□ -0.22
CCS-209ENST00000534763 TRIOO75962 3097 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 TRAV19A0A0A6YYK7 116 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 DPYSL4O14531 572 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 CHADO15335 359 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 CFHP08603 1231 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 USP17L7P0C7H9 530 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 GLULP15104 373 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 NPR3P17342 541 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 ACO1P21399 889 aaKnown RBP13.67□□□□□ -0.22
CCS-209ENST00000534763 VIPR2P41587 438 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 MTIF2P46199 727 aaKnown RBP13.67□□□□□ -0.22
CCS-209ENST00000534763 TUBP50607 506 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 SLC5A3P53794 718 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 SLC8A3P57103 927 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 STARD6P59095 220 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 PLCB2Q00722 1185 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 ZNF394Q53GI3 561 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 PPP1R26Q5T8A7 1209 aaPredicted RBP13.67□□□□□ -0.22
CCS-209ENST00000534763 TXNDC8Q6A555 127 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 TRIM65Q6PJ69 517 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 GBP6Q6ZN66 633 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 CLEC20AQ6ZU45 233 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 SUGP1Q8IWZ8 645 aaKnown RBP13.67□□□□□ -0.22
CCS-209ENST00000534763 MAB21L3Q8N8X9 362 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 ANKRD52Q8NB46 1076 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 TUBGCP2Q9BSJ2 902 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 ARHGEF3Q9NR81 526 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 GCNT4Q9P109 453 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 NFE2L3Q9Y4A8 694 aa13.67□□□□□ -0.22
CCS-209ENST00000534763 PTPRDP23468 1912 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 HHLA1C9JL84 531 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 ARNTLO00327 626 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 ZNF263O14978 683 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 BEST1O76090 585 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 LETM1O95202 739 aaPredicted RBP13.66□□□□□ -0.22
CCS-209ENST00000534763 OLFM2O95897 454 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 ZDHHC11BP0C7U3 371 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 VDRP11473 427 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 ADORA2BP29275 332 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 MAP3K7CLP57077 242 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 LRMPQ12912 555 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 TAF10Q12962 218 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 STILQ15468 1287 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 EXOC3L4Q17RC7 722 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 KLHL40Q2TBA0 621 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 VWA3BQ502W6 1294 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 ARHGAP29Q52LW3 1261 aa13.66□□□□□ -0.22
CCS-209ENST00000534763 SLC44A4Q53GD3 710 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms