RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 LRRC3Q9BY71 257 aa13.12□□□□□ -0.31
CHRDL2-209ENST00000534276 STK33Q9BYT3 514 aa13.12□□□□□ -0.31
CHRDL2-209ENST00000534276 BCO2Q9BYV7 579 aa13.12□□□□□ -0.31
CHRDL2-209ENST00000534276 SEMA4AQ9H3S1 761 aa13.12□□□□□ -0.31
CHRDL2-209ENST00000534276 SIX2Q9NPC8 291 aa13.12□□□□□ -0.31
CHRDL2-209ENST00000534276 RRAGDQ9NQL2 400 aaPredicted RBP13.12□□□□□ -0.31
CHRDL2-209ENST00000534276 HEBP1Q9NRV9 189 aa13.12□□□□□ -0.31
CHRDL2-209ENST00000534276 APEX2Q9UBZ4 518 aa13.12□□□□□ -0.31
CHRDL2-209ENST00000534276 EPN1Q9Y6I3 576 aaPredicted RBP13.12□□□□□ -0.31
CHRDL2-209ENST00000534276 R4GN57 208 aa13.12□□□□□ -0.31
CHRDL2-209ENST00000534276 COL4A3Q01955 1670 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 MTMR11A4FU01 709 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 SHISA7A6NL88 538 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 LRRIQ3A6PVS8 624 aaPredicted RBP13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 CYP11A1P05108 521 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 SERPING1P05155 500 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 SP9P0CG40 484 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 TRIM49P0CI25 452 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 TRIM49CP0CI26 452 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 VIPR2P41587 438 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 PRKCIP41743 596 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 EPHB3P54753 998 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 KRT83P78385 493 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 GRM2Q14416 872 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 TEAD2Q15562 447 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 SFMBT2Q5VUG0 894 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 ZNF852Q6ZMS4 543 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 TMC8Q8IU68 726 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 MAML2Q8IZL2 1156 aaPredicted RBP13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 TTC9BQ8N6N2 239 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 FBXL13Q8NEE6 735 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 OR10T2Q8NGX3 314 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 ZSCAN18Q8TBC5 510 aaPredicted RBP13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 DNASE1L2Q92874 299 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 TMEM209Q96SK2 561 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 NELL2Q99435 816 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 TRMT61BQ9BVS5 477 aaKnown RBP13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 INTS2Q9H0H0 1204 aaKnown RBP13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 BRD9Q9H8M2 597 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 TRPV4Q9HBA0 871 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 DPP3Q9NY33 737 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 RBAKQ9NYW8 714 aaPredicted RBP13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 SLC27A5Q9Y2P5 690 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 ADGRG1Q9Y653 693 aa13.11□□□□□ -0.31
CHRDL2-209ENST00000534276 GPR179Q6PRD1 2367 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 SOWAHDA6NJG2 315 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 LRRC53A6NM62 1247 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 EIF3CLB5ME19 914 aaKnown RBP13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 GFPT2O94808 682 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 IL18RAPO95256 599 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 NDUFA10O95299 355 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 LMNAP02545 664 aaKnown RBP13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 PSMC3P17980 439 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 TARSP26639 723 aaKnown RBP13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 MAGEA9P43362 315 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 ALDH1A3P47895 512 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 GCLMP48507 274 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 TAF6P49848 677 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 JAM2P57087 298 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 ZACNQ401N2 412 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 VITQ6UXI7 678 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 RAD9BQ6WBX8 426 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 SV2AQ7L0J3 742 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 ENOSF1Q7L5Y1 443 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 WDR49Q8IV35 697 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 EFCAB13Q8IY85 973 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 TXLNBQ8N3L3 684 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 JAKMIP2Q96AA8 810 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 CLDN23Q96B33 292 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 SPAG5Q96R06 1193 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 EIF3CQ99613 913 aaKnown RBP13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 CGRRF1Q99675 332 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 GPR88Q9GZN0 384 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 NLRC4Q9NPP4 1024 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 SPATA6Q9NWH7 488 aaPredicted RBP13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 RAB20Q9NX57 234 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 HSFX1Q9UBD0 423 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 DSEQ9UL01 958 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 MRPS17Q9Y2R5 130 aaKnown RBP13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 PPP2R2CQ9Y2T4 447 aa13.1□□□□□ -0.31
CHRDL2-209ENST00000534276 SPTBN4Q9H254 2564 aa13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 A0A1W2PRU2 124 aa13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 CYB561D2O14569 222 aa13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 NCAM2O15394 837 aa13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 IPO7O95373 1038 aaKnown RBP13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 LCA5LO95447 670 aa13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 C4BPAP04003 597 aaKnown RBP13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 FERP16591 822 aa13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 GDI1P31150 447 aa13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 STAT1P42224 750 aa13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 ZC3H14Q6PJT7 736 aaKnown RBP13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 DNAJB7Q7Z6W7 309 aaPredicted RBP13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 NT5DC4Q86YG4 428 aa13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 DEPDC1BQ8WUY9 529 aa13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 IRF7Q92985 503 aa13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 PSMG2Q969U7 264 aa13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 CCDC127Q96BQ5 260 aa13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 FAXDC2Q96IV6 333 aa13.09□□□□□ -0.31
CHRDL2-209ENST00000534276 CCDC42Q96M95 316 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms