RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 LRRC53A6NM62 1247 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 ZNF197O14709 1029 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 XPO1O14980 1071 aaKnown RBP14.89□□□□□ -0.03
CMTM1-218ENST00000533915 TBX10O75333 385 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 RFPL2O75678 378 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 MICAL2O94851 1124 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 PAPLNO95428 1278 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 ADCY5O95622 1261 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 GYPCP04921 128 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 PNMA6AP0CW24 399 aaPredicted RBP14.89□□□□□ -0.03
CMTM1-218ENST00000533915 CDC25BP30305 580 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 CASP14P31944 242 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 MRE11P49959 708 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 CDR1P51861 262 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 RBM10P98175 930 aaKnown RBP14.89□□□□□ -0.03
CMTM1-218ENST00000533915 SYCE2Q6PIF2 218 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 TRIM72Q6ZMU5 477 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 DENND5BQ6ZUT9 1274 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.89□□□□□ -0.03
CMTM1-218ENST00000533915 GPR149Q86SP6 731 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 NUP93Q8N1F7 819 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 TTC9BQ8N6N2 239 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 MSANTD4Q8NCY6 345 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 MSLNLQ96KJ4 702 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 GCNAQ96QF7 691 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 FBXO44Q9H4M3 255 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 PCDHGC3Q9UN70 934 aa14.89□□□□□ -0.03
CMTM1-218ENST00000533915 AKR1B15C9JRZ8 316 aaPredicted RBP14.88□□□□□ -0.03
CMTM1-218ENST00000533915 AP5Z1O43299 807 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 SOAT2O75908 522 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 LSM8O95777 96 aaKnown RBP14.88□□□□□ -0.03
CMTM1-218ENST00000533915 ATF6P18850 670 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 LTBRP36941 435 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 PPP3CCP48454 512 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 CDR2Q01850 454 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 KLHL30Q0D2K2 578 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 SMAD4Q13485 552 aaKnown RBP14.88□□□□□ -0.03
CMTM1-218ENST00000533915 PABPC1LQ4VXU2 614 aaKnown RBP14.88□□□□□ -0.03
CMTM1-218ENST00000533915 PPP1R2P3Q6NXS1 205 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 CLEC20AQ6ZU45 233 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 DNAJB7Q7Z6W7 309 aaPredicted RBP14.88□□□□□ -0.03
CMTM1-218ENST00000533915 C12orf76Q8N812 135 aaPredicted RBP14.88□□□□□ -0.03
CMTM1-218ENST00000533915 SMRP1Q8NCR6 262 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 TMEM35BQ8NCS4 154 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 OR8K1Q8NGG5 319 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 EPS8L1Q8TE68 723 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 GIPC2Q8TF65 315 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 STK32AQ8WU08 396 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 HSFY1Q96LI6 401 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 SMOQ99835 787 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 MIS12Q9H081 205 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 LHX5Q9H2C1 402 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 LRRC4Q9HBW1 653 aa14.88□□□□□ -0.03
CMTM1-218ENST00000533915 SLC38A8A6NNN8 435 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 H3BQ06 376 aaPredicted RBP14.87□□□□□ -0.03
CMTM1-218ENST00000533915 SERPING1P05155 500 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 CDC25CP30307 473 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 ACADSBP45954 432 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 PLA2G4AP47712 749 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 DLX2Q07687 328 aaPredicted RBP14.87□□□□□ -0.03
CMTM1-218ENST00000533915 PDE4CQ08493 712 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 LEXMQ3ZCV2 418 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 PDZD4Q76G19 769 aaPredicted RBP14.87□□□□□ -0.03
CMTM1-218ENST00000533915 PDZD8Q8NEN9 1154 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 UBA3Q8TBC4 463 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 SECISBP2LQ93073 1101 aaKnown RBP14.87□□□□□ -0.03
CMTM1-218ENST00000533915 ZNF707Q96C28 371 aaPredicted RBP14.87□□□□□ -0.03
CMTM1-218ENST00000533915 TRMT2BQ96GJ1 504 aaKnown RBP14.87□□□□□ -0.03
CMTM1-218ENST00000533915 SLITRK1Q96PX8 696 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 KCNK16Q96T55 309 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 CORO1BQ9BR76 489 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 S1PR5Q9H228 398 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 CYLDQ9NQC7 956 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 IMPACTQ9P2X3 320 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 ZMYM5Q9UJ78 669 aa14.87□□□□□ -0.03
CMTM1-218ENST00000533915 MAGED2Q9UNF1 606 aaPredicted RBP14.87□□□□□ -0.03
CMTM1-218ENST00000533915 REV3LO60673 3130 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 TNFAIP3P21580 790 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 YWHAQP27348 245 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 PRKCIP41743 596 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 GPR15P49685 360 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 SLC5A3P53794 718 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 GSE1Q14687 1217 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 CLUL1Q15846 466 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 PKDCCQ504Y2 493 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 TDRD12Q587J7 1177 aaKnown RBP14.86□□□□□ -0.03
CMTM1-218ENST00000533915 SDHAF4Q5VUM1 108 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 TAF3Q5VWG9 929 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 IRF2BP2Q7Z5L9 587 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 GRASPQ7Z6J2 395 aaPredicted RBP14.86□□□□□ -0.03
CMTM1-218ENST00000533915 NOP9Q86U38 636 aaKnown RBP14.86□□□□□ -0.03
CMTM1-218ENST00000533915 PIGZQ86VD9 579 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 TTC30AQ86WT1 665 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 SIX6OS1Q8N1H7 587 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 GPR152Q8TDT2 470 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 IPO4Q8TEX9 1081 aaKnown RBP14.86□□□□□ -0.03
CMTM1-218ENST00000533915 KCTD13Q8WZ19 329 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 OVCA2Q8WZ82 227 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 MYRFLQ96LU7 910 aa14.86□□□□□ -0.03
CMTM1-218ENST00000533915 AGPAT1Q99943 283 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms