RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 TXNDC8Q6A555 127 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 MON1AQ86VX9 555 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 CMTM8Q8IZV2 173 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 FUKQ8N0W3 1084 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 NUP93Q8N1F7 819 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 PPM1KQ8N3J5 372 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 IRF7Q92985 503 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 JAKMIP2Q96AA8 810 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 CYFIP2Q96F07 1278 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 TWNKQ96RR1 684 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 ARID3AQ99856 593 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 THAP9Q9H5L6 903 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 THG1LQ9NWX6 298 aaKnown RBP14.19□□□□□ -0.14
CAPN1-227ENST00000533909 SOBPA7XYQ1 873 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 PES1O00541 588 aaKnown RBP14.18□□□□□ -0.14
CAPN1-227ENST00000533909 PDGFBP01127 241 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-227ENST00000533909 USP17L7P0C7H9 530 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 CD19P15391 556 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 COL9A1P20849 921 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 YWHAQP27348 245 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 PPP3CCP48454 512 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 CACNA2D1P54289 1103 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 MAP3K7CLP57077 242 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 VITQ6UXI7 678 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 MFSD6LQ8IWD5 586 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 CELF5Q8N6W0 485 aaKnown RBP14.18□□□□□ -0.14
CAPN1-227ENST00000533909 EHBP1Q8NDI1 1231 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 CSGALNACT1Q8TDX6 532 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 FBXO32Q969P5 355 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 TMEM176AQ96HP8 235 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 KCNK16Q96T55 309 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 HNRNPABQ99729 332 aaKnown RBP14.18□□□□□ -0.14
CAPN1-227ENST00000533909 SLC46A2Q9BY10 475 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 PLA2G2FQ9BZM2 168 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 SMG9Q9H0W8 520 aaKnown RBP14.18□□□□□ -0.14
CAPN1-227ENST00000533909 ANO10Q9NW15 660 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 GCNT4Q9P109 453 aa14.18□□□□□ -0.14
CAPN1-227ENST00000533909 PRKCSHP14314 528 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-227ENST00000533909 WEE1P30291 646 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 SLC5A3P53794 718 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 USP46P62068 366 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 TAF10Q12962 218 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 STX1AQ16623 288 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 CC2D1AQ6P1N0 951 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-227ENST00000533909 POTEHQ6S545 545 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 TMEM150AQ86TG1 271 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 PDZD8Q8NEN9 1154 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 DNASE1L2Q92874 299 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 TTLL2Q9BWV7 592 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 INTS2Q9H0H0 1204 aaKnown RBP14.17□□□□□ -0.14
CAPN1-227ENST00000533909 TBC1D17Q9HA65 648 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 KIF9Q9HAQ2 790 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 TDP1Q9NUW8 608 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 OBP2AQ9NY56 170 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 HESX1Q9UBX0 185 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 PCDHB4Q9Y5E5 795 aa14.17□□□□□ -0.14
CAPN1-227ENST00000533909 PRAMEF12O95522 483 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 TPM2P07951 284 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 NPR3P17342 541 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 HDCP19113 662 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 RAD23BP54727 409 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 PLCB2Q00722 1185 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 PRKCQQ04759 706 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 MLF2Q15773 248 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-227ENST00000533909 ARHGAP29Q52LW3 1261 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 SLC44A4Q53GD3 710 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 SGO2Q562F6 1265 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 HSP90AA4PQ58FG1 418 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 ASTLQ6HA08 431 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-227ENST00000533909 TMEM270Q6UE05 265 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 GBP6Q6ZN66 633 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 PAQR9Q6ZVX9 377 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 RRAGAQ7L523 313 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 SLC4A11Q8NBS3 891 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 BPIFB1Q8TDL5 484 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 WHAMMQ8TF30 809 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 SMOQ99835 787 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 NACA2Q9H009 215 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 FBXO44Q9H4M3 255 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 TMEM30AQ9NV96 361 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 COMMD8Q9NX08 183 aa14.16□□□□□ -0.14
CAPN1-227ENST00000533909 PTPRDP23468 1912 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 KRBA1A5PL33 1030 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 TADA3O75528 432 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 PTMSP20962 102 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 KPNA1P52294 538 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-227ENST00000533909 GCNT1Q02742 428 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 MAN2A1Q16706 1144 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 PPP1R26Q5T8A7 1209 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-227ENST00000533909 CLEC20AQ6ZU45 233 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 TPRG1Q6ZUI0 275 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 ARL14EPQ8N8R7 260 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-227ENST00000533909 ANKRD20A12PQ8NF67 263 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 SCAMP5Q8TAC9 235 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 OVCA2Q8WZ82 227 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 USP13Q92995 863 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-227ENST00000533909 RSPRY1Q96DX4 576 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 FAM81BQ96LP2 452 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 MED15Q96RN5 788 aa14.15□□□□□ -0.14
CAPN1-227ENST00000533909 CYP2S1Q96SQ9 504 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms