RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 LMNAP02545 664 aaKnown RBP11.11□□□□□ -0.63
CAPN1-225ENST00000533704 FAM163BP0C2L3 166 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 ARSAP15289 507 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 HDCP19113 662 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 RPL13P26373 211 aaKnown RBP11.11□□□□□ -0.63
CAPN1-225ENST00000533704 PSMC2P35998 433 aaKnown RBP11.11□□□□□ -0.63
CAPN1-225ENST00000533704 GCLMP48507 274 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 CACNA2D1P54289 1103 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 CLDN10P78369 228 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 FAM160A1Q05DH4 1040 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 ADAM9Q13443 819 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 LRRC32Q14392 662 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 MTF1Q14872 753 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 SGSM1Q2NKQ1 1148 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 ZACNQ401N2 412 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 SV2AQ7L0J3 742 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 ACOT1Q86TX2 421 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 RALGPS2Q86X27 583 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-225ENST00000533704 FMR1NBQ8N0W7 255 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-225ENST00000533704 RIN3Q8TB24 985 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 ATRIPQ8WXE1 791 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 ERCC4Q92889 916 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-225ENST00000533704 MSANTD3Q96H12 275 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 IMPG2Q9BZV3 1241 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 RMND1Q9NWS8 449 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 FBXO4Q9UKT5 387 aa11.11□□□□□ -0.63
CAPN1-225ENST00000533704 OTOGLQ3ZCN5 2332 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 SMC2O95347 1197 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 CHRNB1P11230 501 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 CCDC130P13994 396 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 IFNAR2P48551 515 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 TAF10Q12962 218 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 RUNX3Q13761 415 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 ZNF268Q14587 947 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-225ENST00000533704 C1orf220Q5T0J3 134 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 C1orf228Q6PIY5 440 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 Q6ZS52 159 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 INTS8Q75QN2 995 aaKnown RBP11.1□□□□□ -0.63
CAPN1-225ENST00000533704 FAM35AQ86V20 835 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 ZNF687Q8N1G0 1237 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 SH3RF2Q8TEC5 729 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 TNIP3Q96KP6 325 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 C8orf48Q96LL4 319 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 TSG101Q99816 390 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 FAM83CQ9BQN1 747 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 VRTNQ9H8Y1 702 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 HPS4Q9NQG7 708 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 KRT82Q9NSB4 513 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 FAM49BQ9NUQ9 324 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 TMEM30AQ9NV96 361 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 DUS2Q9NX74 493 aaKnown RBP11.1□□□□□ -0.63
CAPN1-225ENST00000533704 EHD2Q9NZN4 543 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 GCNT4Q9P109 453 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 HMGXB4Q9UGU5 601 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 WNT6Q9Y6F9 365 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 SDK1Q7Z5N4 2213 aa11.1□□□□□ -0.63
CAPN1-225ENST00000533704 SPAG17Q6Q759 2223 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 GPR179Q6PRD1 2367 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 SOBPA7XYQ1 873 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 SCAMP3O14828 347 aaKnown RBP11.09□□□□□ -0.63
CAPN1-225ENST00000533704 IKBKBO14920 756 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 CETN3O15182 167 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 MAPK13O15264 365 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 AP1G2O75843 785 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 ASS1P00966 412 aaKnown RBP11.09□□□□□ -0.63
CAPN1-225ENST00000533704 EPB41P11171 864 aaKnown RBP11.09□□□□□ -0.63
CAPN1-225ENST00000533704 CD58P19256 250 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 YWHAQP27348 245 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 PRCPP42785 496 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 CXCL12P48061 93 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 PDE6CP51160 858 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 CCR3P51677 355 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 NDST1P52848 882 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 MLLT6P55198 1093 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-225ENST00000533704 NOP14P78316 857 aaKnown RBP11.09□□□□□ -0.63
CAPN1-225ENST00000533704 SATB1Q01826 763 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 PPP3CAQ08209 521 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 USP4Q13107 963 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 PPP2R5DQ14738 602 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 PDGFRLQ15198 375 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 ZNF77Q15935 545 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 NFIL3Q16649 462 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 ZNF528Q3MIS6 628 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 DGKKQ5KSL6 1271 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 ISM2Q6H9L7 571 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 NUP93Q8N1F7 819 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 CPA6Q8N4T0 437 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 CCDC150Q8NCX0 1101 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 TAS1R2Q8TE23 839 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 TMEM174Q8WUU8 243 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 TAF4BQ92750 862 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 SMARCE1Q969G3 411 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 FBXO32Q969P5 355 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 JAKMIP2Q96AA8 810 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 SMARCD1Q96GM5 515 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 CEP295NLQ96MC4 621 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 SLITRK1Q96PX8 696 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 KCNK16Q96T55 309 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 TTLL2Q9BWV7 592 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 SEMA4AQ9H3S1 761 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms