RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 CDC42EP1Q00587 391 aa20.21■□□□□ 0.83
UBXN1-215ENST00000533476 MKRN3Q13064 507 aaKnown RBP20.21■□□□□ 0.83
UBXN1-215ENST00000533476 GOLGA7BQ2TAP0 167 aa20.21■□□□□ 0.83
UBXN1-215ENST00000533476 FAM183BPQ6ZVS7 135 aa20.21■□□□□ 0.83
UBXN1-215ENST00000533476 PLEKHH3Q7Z736 793 aa20.21■□□□□ 0.83
UBXN1-215ENST00000533476 TDRPQ86YL5 185 aa20.21■□□□□ 0.83
UBXN1-215ENST00000533476 RFX6Q8HWS3 928 aa20.21■□□□□ 0.83
UBXN1-215ENST00000533476 CCDC13Q8IYE1 715 aa20.21■□□□□ 0.83
UBXN1-215ENST00000533476 HSPH1Q92598 858 aa20.21■□□□□ 0.83
UBXN1-215ENST00000533476 PEBP4Q96S96 227 aa20.21■□□□□ 0.83
UBXN1-215ENST00000533476 RSAD1Q9HA92 442 aa20.21■□□□□ 0.83
UBXN1-215ENST00000533476 SETD4Q9NVD3 440 aa20.21■□□□□ 0.83
UBXN1-215ENST00000533476 EXOC1LA0A1B0GW35 172 aa20.2■□□□□ 0.82
UBXN1-215ENST00000533476 E5RJQ4 531 aa20.2■□□□□ 0.82
UBXN1-215ENST00000533476 BRAFP15056 766 aa20.2■□□□□ 0.82
UBXN1-215ENST00000533476 RDXP35241 583 aaKnown RBP20.2■□□□□ 0.82
UBXN1-215ENST00000533476 PSMC4P43686 418 aa20.2■□□□□ 0.82
UBXN1-215ENST00000533476 GDF10P55107 478 aa20.2■□□□□ 0.82
UBXN1-215ENST00000533476 NR1H3Q13133 447 aa20.2■□□□□ 0.82
UBXN1-215ENST00000533476 TAF5Q15542 800 aa20.2■□□□□ 0.82
UBXN1-215ENST00000533476 SWT1Q5T5J6 900 aaKnown RBP20.2■□□□□ 0.82
UBXN1-215ENST00000533476 SLC27A1Q6PCB7 646 aa20.2■□□□□ 0.82
UBXN1-215ENST00000533476 PPIL6Q8IXY8 311 aa20.2■□□□□ 0.82
UBXN1-215ENST00000533476 PARK7Q99497 189 aaKnown RBP20.2■□□□□ 0.82
UBXN1-215ENST00000533476 GCOM2Q9BZD3 368 aaPredicted RBP20.2■□□□□ 0.82
UBXN1-215ENST00000533476 OSBPL7Q9BZF2 842 aa20.2■□□□□ 0.82
UBXN1-215ENST00000533476 GBA2Q9HCG7 927 aaPredicted RBP20.2■□□□□ 0.82
UBXN1-215ENST00000533476 KAT6AQ92794 2004 aa20.2■□□□□ 0.82
UBXN1-215ENST00000533476 ENDOD1O94919 500 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 CTCFP49711 727 aaPredicted RBP20.19■□□□□ 0.82
UBXN1-215ENST00000533476 ITIH4Q14624 930 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 FASTKD3Q14CZ7 662 aaKnown RBP20.19■□□□□ 0.82
UBXN1-215ENST00000533476 FAM110CQ1W6H9 321 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 ANKRD20A8PQ5CZ79 823 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 OR6B2Q6IFH4 312 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 TRNP1Q6NT89 227 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 CHADLQ6NUI6 762 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 CYP4V2Q6ZWL3 525 aaPredicted RBP20.19■□□□□ 0.82
UBXN1-215ENST00000533476 DYDC1Q8WWB3 177 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 RXFP2Q8WXD0 754 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 RSAD2Q8WXG1 361 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 MAML1Q92585 1016 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 PPCSQ9HAB8 311 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 TBK1Q9UHD2 729 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.19■□□□□ 0.82
UBXN1-215ENST00000533476 DPYSL4O14531 572 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 ADCY6O43306 1168 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 GPR32O75388 356 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 VIMP08670 466 aaKnown RBP20.19■□□□□ 0.82
UBXN1-215ENST00000533476 SETSIPP0DME0 302 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 PDGFRAP16234 1089 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 GCAP28676 217 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 PCBP1Q15365 356 aaKnown RBP eCLIP20.19■□□□□ 0.82
UBXN1-215ENST00000533476 HIF1AQ16665 826 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 PKDCCQ504Y2 493 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 CATSPER4Q7RTX7 472 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 LRRC52Q8N7C0 313 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 ANKS4BQ8N8V4 417 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 CCT6BQ92526 530 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 CALN1Q9BXU9 219 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 KCNK9Q9NPC2 374 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 SNTG2Q9NY99 539 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 SAMD15Q9P1V8 674 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 CLEC11AQ9Y240 323 aa20.19■□□□□ 0.82
UBXN1-215ENST00000533476 SLC15A5A6NIM6 579 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 FOXO6A8MYZ6 492 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 SMAPO00193 183 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 MCF2LO15068 1137 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 RASSF9O75901 435 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 YY1P25490 414 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 RPL22P35268 128 aaKnown RBP20.18■□□□□ 0.82
UBXN1-215ENST00000533476 EIF3EP60228 445 aaKnown RBP20.18■□□□□ 0.82
UBXN1-215ENST00000533476 FKBP1BP68106 108 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 TMED2Q15363 201 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 ZBTB6Q15916 424 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 NOTUMQ6P988 496 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 SRRM1Q8IYB3 904 aaKnown RBP20.18■□□□□ 0.82
UBXN1-215ENST00000533476 ZBED8Q8IZ13 594 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 C12orf29Q8N999 325 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 NPLOC4Q8TAT6 608 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 MGARPQ8TDB4 240 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 CPT1BQ92523 772 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 ZMAT2Q96NC0 199 aaKnown RBP20.18■□□□□ 0.82
UBXN1-215ENST00000533476 MRPL45Q9BRJ2 306 aaKnown RBP20.18■□□□□ 0.82
UBXN1-215ENST00000533476 FAM49AQ9H0Q0 323 aaPredicted RBP20.18■□□□□ 0.82
UBXN1-215ENST00000533476 CXCL16Q9H2A7 254 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 RRAGCQ9HB90 399 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 NMRK2Q9NPI5 230 aa20.18■□□□□ 0.82
UBXN1-215ENST00000533476 YARSP54577 528 aaKnown RBP20.17■□□□□ 0.82
UBXN1-215ENST00000533476 PDIA2Q13087 525 aaKnown RBP20.17■□□□□ 0.82
UBXN1-215ENST00000533476 MPP2Q14168 576 aa20.17■□□□□ 0.82
UBXN1-215ENST00000533476 LRRC14Q15048 493 aa20.17■□□□□ 0.82
UBXN1-215ENST00000533476 PPP1R26Q5T8A7 1209 aaPredicted RBP20.17■□□□□ 0.82
UBXN1-215ENST00000533476 SH3PXD2AQ5TCZ1 1133 aa20.17■□□□□ 0.82
UBXN1-215ENST00000533476 OLFML1Q6UWY5 402 aa20.17■□□□□ 0.82
UBXN1-215ENST00000533476 ANKRD42Q8N9B4 389 aa20.17■□□□□ 0.82
UBXN1-215ENST00000533476 NAT8LQ8N9F0 302 aa20.17■□□□□ 0.82
UBXN1-215ENST00000533476 BEST2Q8NFU1 509 aa20.17■□□□□ 0.82
UBXN1-215ENST00000533476 CKAP2Q8WWK9 683 aa20.17■□□□□ 0.82
UBXN1-215ENST00000533476 PIWIL1Q96J94 861 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms