RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 PSMA3P25788 255 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 EFR3AQ14156 821 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 KYAT1Q16773 422 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 ASPRV1Q53RT3 343 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 KCNV1Q6PIU1 500 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 RBM12BQ8IXT5 1001 aaKnown RBP8.13□□□□□ -1.11
CSRP1-218ENST00000533402 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.13□□□□□ -1.11
CSRP1-218ENST00000533402 OTUB1Q96FW1 271 aaPredicted RBP8.13□□□□□ -1.11
CSRP1-218ENST00000533402 MKNK1Q9BUB5 465 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 WDR12Q9GZL7 423 aaKnown RBP8.13□□□□□ -1.11
CSRP1-218ENST00000533402 AKAP7Q9P0M2 348 aaPredicted RBP8.13□□□□□ -1.11
CSRP1-218ENST00000533402 ZBTB1Q9Y2K1 713 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 USP17L3A6NCW0 530 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 USP17L4A6NCW7 530 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 SERPINB5P36952 375 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 MAGEA4P43358 317 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 ZSWIM7Q19AV6 140 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 XKR9Q5GH70 373 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 ERICH5Q6P6B1 374 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 USP17L1Q7RTZ2 530 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 NLRP10Q86W26 655 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 DEFB107AQ8IZN7 70 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 C7orf31Q8N865 590 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 RDM1Q8NG50 284 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 OR7A2PQ8NGA2 310 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 ATXN2LQ8WWM7 1075 aaKnown RBP8.13□□□□□ -1.11
CSRP1-218ENST00000533402 PDCD10Q9BUL8 212 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 RERGLQ9H628 205 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 FOXN3O00409 490 aaPredicted RBP8.13□□□□□ -1.11
CSRP1-218ENST00000533402 NPTXRO95502 500 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 FTLP02792 175 aaPredicted RBP8.13□□□□□ -1.11
CSRP1-218ENST00000533402 ASNSP08243 561 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 ZAP70P43403 619 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 NKX1-1Q15270 411 aaPredicted RBP8.13□□□□□ -1.11
CSRP1-218ENST00000533402 SLC18A3Q16572 532 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 PPP1R15BQ5SWA1 713 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 SEPT12Q8IYM1 358 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 TBATAQ96M53 351 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 KLF6Q99612 283 aaPredicted RBP8.13□□□□□ -1.11
CSRP1-218ENST00000533402 TRPV5Q9NQA5 729 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 MED1Q15648 1581 aaPredicted RBP8.13□□□□□ -1.11
CSRP1-218ENST00000533402 FAM196BA6NMK8 535 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 CLOCKO15516 846 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 SEC24AO95486 1093 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 FCGR1AP12314 374 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 RAB27AP51159 221 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 GSCP56915 257 aaPredicted RBP8.13□□□□□ -1.11
CSRP1-218ENST00000533402 CACNB1Q02641 598 aaPredicted RBP8.13□□□□□ -1.11
CSRP1-218ENST00000533402 SPIDRQ14159 915 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 PDCD4Q53EL6 469 aaKnown RBP8.13□□□□□ -1.11
CSRP1-218ENST00000533402 LRRC8DQ7L1W4 858 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 ZNF341Q9BYN7 854 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 PSTPIP2Q9H939 334 aa8.13□□□□□ -1.11
CSRP1-218ENST00000533402 PEX1O43933 1283 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 FKBP9O95302 570 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 POLA2Q14181 598 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 SMU1Q2TAY7 513 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 FAM47AQ5JRC9 791 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 TCHHL1Q5QJ38 904 aaPredicted RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 CENPPQ6IPU0 288 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 FKBP9P1Q75LS8 142 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 NECAB2Q7Z6G3 386 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 RNF135Q8IUD6 432 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 BTN2A2Q8WVV5 523 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 RMDN1Q96DB5 314 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 ATXN7L3BQ96GX2 97 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 ING3Q9NXR8 418 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 ADAM22Q9P0K1 906 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 PCDHA4Q9UN74 947 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 HEY1Q9Y5J3 304 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 ZNF263O14978 683 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 CLCN2P51788 898 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 KCNH2Q12809 1159 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 GRAPQ13588 217 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 NCF4Q15080 339 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 SLC10A5Q5PT55 438 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 C3orf62Q6ZUJ4 267 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 SZRD1Q7Z422 152 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 GRAPLQ8TC17 118 aaPredicted RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 DQX1Q8TE96 717 aaKnown RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 WNK4Q96J92 1243 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 ADAMTSL3P82987 1691 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 NDUFB5O43674 189 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 CYBBP04839 570 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 DLG4P78352 724 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 NCCRP1Q6ZVX7 275 aaPredicted RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 BBS7Q8IWZ6 715 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 WDR11Q9BZH6 1224 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 SERHL2Q9H4I8 314 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 KANSL2Q9H9L4 492 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 SERHLQ9NQF3 203 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 KANSL1LA0AUZ9 987 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 TNFAIP2Q03169 654 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 TTC39BQ5VTQ0 682 aaPredicted RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 FAM180AQ6UWF9 173 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 RHOT1Q8IXI2 618 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 SVOPQ8N4V2 548 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 RNASE11Q8TAA1 199 aaKnown RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 RASSF5Q8WWW0 418 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 SAR1AQ9NR31 198 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms