RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TADA3O75528 432 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 CALCAP01258 141 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 F11P03951 625 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 VDRP11473 427 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 CD19P15391 556 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 KLK7P49862 253 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 MAP3K7CLP57077 242 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 TEAD2Q15562 447 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 ARHGAP44Q17R89 818 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 SGO2Q562F6 1265 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 FKBP15Q5T1M5 1219 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 DENND5BQ6ZUT9 1274 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 RNF135Q8IUD6 432 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 MCRS1Q96EZ8 462 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 ZSWIM1Q9BR11 485 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 TTLL2Q9BWV7 592 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 NAA15Q9BXJ9 866 aaKnown RBP12.7□□□□□ -0.38
SSBP3-214ENST00000533209 DUSP16Q9BY84 665 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 ATXN3LQ9H3M9 355 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 PLCB1Q9NQ66 1216 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 GDE1Q9NZC3 331 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 UXTQ9UBK9 157 aaPredicted RBP12.7□□□□□ -0.38
SSBP3-214ENST00000533209 DNAJC12Q9UKB3 198 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 KIAA1257Q9ULG3 409 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 SIK3Q9Y2K2 1263 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 FHOD1Q9Y613 1164 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 PTPRDP23468 1912 aa12.7□□□□□ -0.38
SSBP3-214ENST00000533209 CUL9Q8IWT3 2517 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 HHLA1C9JL84 531 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 O00370 1275 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 KRT5P13647 590 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 UCHL3P15374 230 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 NPR3P17342 541 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 CDC25CP30307 473 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 SLC5A3P53794 718 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 CYP4F8P98187 520 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 UBXN1Q04323 297 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 SYCP1Q15431 976 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 STXBP5Q5T5C0 1151 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 SMYD5Q6GMV2 418 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 TTC30AQ86WT1 665 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 NUP93Q8N1F7 819 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 ANKRD52Q8NB46 1076 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 SCAMP5Q8TAC9 235 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 ZSWIM3Q96MP5 696 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 ERGIC2Q96RQ1 377 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 GANQ9H2C0 597 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 TSPY26PQ9H489 355 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 RTN4Q9NQC3 1192 aaKnown RBP12.69□□□□□ -0.38
SSBP3-214ENST00000533209 IL37Q9NZH6 218 aa12.69□□□□□ -0.38
SSBP3-214ENST00000533209 DOCK8Q8NF50 2099 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 ANHXE9PGG2 379 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 FOXN3O00409 490 aaPredicted RBP12.68□□□□□ -0.38
SSBP3-214ENST00000533209 EPHB6O15197 1021 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 TEX33O43247 280 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 ASGR2P07307 311 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 BRD2P25440 801 aaKnown RBP12.68□□□□□ -0.38
SSBP3-214ENST00000533209 ZNF445P59923 1031 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 HTR4Q13639 388 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 CNGA2Q16280 664 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 GOLGA7BQ2TAP0 167 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 PKDCCQ504Y2 493 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 GPR158Q5T848 1215 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 LCLAT1Q6UWP7 414 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 GPRIN1Q7Z2K8 1008 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 ST13P5Q8NFI4 369 aaPredicted RBP12.68□□□□□ -0.38
SSBP3-214ENST00000533209 RSAD2Q8WXG1 361 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 FGF14Q92915 247 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 KHSRPQ92945 711 aaKnown RBP eCLIP12.68□□□□□ -0.38
SSBP3-214ENST00000533209 NAP1L5Q96NT1 182 aaPredicted RBP12.68□□□□□ -0.38
SSBP3-214ENST00000533209 GPR88Q9GZN0 384 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 KCNK12Q9HB15 430 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 PNPLA8Q9NP80 782 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 TSPAN16Q9UKR8 245 aa12.68□□□□□ -0.38
SSBP3-214ENST00000533209 A0A1B0GTH6 734 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 FAM92AA1XBS5 289 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 TULP2O00295 520 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 RTN3O95197 1032 aaPredicted RBP12.67□□□□□ -0.38
SSBP3-214ENST00000533209 PNMA6AP0CW24 399 aaPredicted RBP12.67□□□□□ -0.38
SSBP3-214ENST00000533209 RFX1P22670 979 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 FCARP24071 287 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 USP8P40818 1118 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 BCAT1P54687 386 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 TPM4P67936 248 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 PDE4CQ08493 712 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 IFRD2Q12894 506 aaPredicted RBP12.67□□□□□ -0.38
SSBP3-214ENST00000533209 TAF10Q12962 218 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 RAPGEF1Q13905 1077 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 DRAP1Q14919 205 aaPredicted RBP12.67□□□□□ -0.38
SSBP3-214ENST00000533209 ARHGAP15Q53QZ3 475 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 FAM78AQ5JUQ0 283 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 PARM1Q6UWI2 310 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 FAM71AQ8IYT1 594 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 ASB16Q96NS5 453 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 GCNAQ96QF7 691 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 SLC46A2Q9BY10 475 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 UBXN6Q9BZV1 441 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 SLITRK6Q9H5Y7 841 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 TASP1Q9H6P5 420 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 ACP6Q9NPH0 428 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms