RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 SPOPLQ6IQ16 392 aa17.7■□□□□ 0.42
PKP3-209ENST00000533069 SASS6Q6UVJ0 657 aa17.7■□□□□ 0.42
PKP3-209ENST00000533069 FAM35AQ86V20 835 aa17.7■□□□□ 0.42
PKP3-209ENST00000533069 GPIHBP1Q8IV16 184 aa17.7■□□□□ 0.42
PKP3-209ENST00000533069 USP13Q92995 863 aaPredicted RBP17.7■□□□□ 0.42
PKP3-209ENST00000533069 LRRC3BQ96PB8 259 aa17.7■□□□□ 0.42
PKP3-209ENST00000533069 DNAI2Q9GZS0 605 aa17.7■□□□□ 0.42
PKP3-209ENST00000533069 SMG9Q9H0W8 520 aaKnown RBP17.7■□□□□ 0.42
PKP3-209ENST00000533069 C8orf33Q9H7E9 229 aaPredicted RBP17.7■□□□□ 0.42
PKP3-209ENST00000533069 MMRN2Q9H8L6 949 aa17.7■□□□□ 0.42
PKP3-209ENST00000533069 TDP1Q9NUW8 608 aa17.7■□□□□ 0.42
PKP3-209ENST00000533069 CKMP06732 381 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 USP17L7P0C7H9 530 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 CCDC192P0DO97 292 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 CD72P21854 359 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 TARSP26639 723 aaKnown RBP17.69■□□□□ 0.42
PKP3-209ENST00000533069 RPS9P46781 194 aaKnown RBP17.69■□□□□ 0.42
PKP3-209ENST00000533069 NDST1P52848 882 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 PMS1P54277 932 aaKnown RBP17.69■□□□□ 0.42
PKP3-209ENST00000533069 ZNF445P59923 1031 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 CAMK4Q16566 473 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 FOXR2Q6PJQ5 311 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 CRYBG2Q8N1P7 616 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 TTC39CQ8N584 583 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 FBXL13Q8NEE6 735 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 CLDN23Q96B33 292 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 ELMO3Q96BJ8 720 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 EEF2KMTQ96G04 330 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 SMARCD1Q96GM5 515 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 MED10Q9BTT4 135 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 TRPC7Q9HCX4 862 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 DMAP1Q9NPF5 467 aaPredicted RBP17.69■□□□□ 0.42
PKP3-209ENST00000533069 TRPM5Q9NZQ8 1165 aa17.69■□□□□ 0.42
PKP3-209ENST00000533069 MTF2Q9Y483 593 aaPredicted RBP17.69■□□□□ 0.42
PKP3-209ENST00000533069 SHISA7A6NL88 538 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 CLDN5O00501 218 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 LRRN2O75325 713 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 RTN3O95197 1032 aaPredicted RBP17.68■□□□□ 0.42
PKP3-209ENST00000533069 KPNA1P52294 538 aaPredicted RBP17.68■□□□□ 0.42
PKP3-209ENST00000533069 CACNA2D1P54289 1103 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 USP46P62068 366 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 MORC3Q14149 939 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 DCAF17Q5H9S7 520 aaPredicted RBP17.68■□□□□ 0.42
PKP3-209ENST00000533069 ACOT1Q86TX2 421 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 C1orf210Q8IVY1 113 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 NUP93Q8N1F7 819 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 FAM3CQ92520 227 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 CEP63Q96MT8 703 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 SLITRK1Q96PX8 696 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 FAM124BQ9H5Z6 455 aaPredicted RBP17.68■□□□□ 0.42
PKP3-209ENST00000533069 APOBEC3GQ9HC16 384 aaKnown RBP17.68■□□□□ 0.42
PKP3-209ENST00000533069 METTL14Q9HCE5 456 aaKnown RBP17.68■□□□□ 0.42
PKP3-209ENST00000533069 FAM86C1Q9NVL1 165 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 HMGXB4Q9UGU5 601 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 ARMCX3Q9UH62 379 aaPredicted RBP17.68■□□□□ 0.42
PKP3-209ENST00000533069 CCL26Q9Y258 94 aa17.68■□□□□ 0.42
PKP3-209ENST00000533069 COL4A2P08572 1712 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 BICDL2A1A5D9 508 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 TRIM49BA6NDI0 452 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 NBL1P41271 181 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 MRE11P49959 708 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 CT47A1Q5JQC4 288 aaPredicted RBP17.67■□□□□ 0.42
PKP3-209ENST00000533069 TCERG1LQ5VWI1 586 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 CC2D1AQ6P1N0 951 aaPredicted RBP17.67■□□□□ 0.42
PKP3-209ENST00000533069 RALGPS2Q86X27 583 aaPredicted RBP17.67■□□□□ 0.42
PKP3-209ENST00000533069 FUKQ8N0W3 1084 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 PDZD8Q8NEN9 1154 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 OVCA2Q8WZ82 227 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 ZFYVE19Q96K21 471 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 IER2Q9BTL4 223 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 NT5C1AQ9BXI3 368 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 KRT82Q9NSB4 513 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 TMEM30AQ9NV96 361 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 COMMD8Q9NX08 183 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 RAB20Q9NX57 234 aa17.67■□□□□ 0.42
PKP3-209ENST00000533069 NUP210Q8TEM1 1887 aaPredicted RBP17.67■□□□□ 0.42
PKP3-209ENST00000533069 ZNF840PA6NDX5 716 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 PROB1E7EW31 1015 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 CILPO75339 1184 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 AP1G2O75843 785 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 TCF3P15923 654 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 PDGFRLQ15198 375 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 ITPRIPL2Q3MIP1 535 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 WDR44Q5JSH3 913 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 ISM2Q6H9L7 571 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 LRSAM1Q6UWE0 723 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 PAQR9Q6ZVX9 377 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 ZNF687Q8N1G0 1237 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 SLC2A14Q8TDB8 520 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 FAM83CQ9BQN1 747 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.66■□□□□ 0.422e-6■■■■■ 421.6
PKP3-209ENST00000533069 ANO10Q9NW15 660 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 SPATA6Q9NWH7 488 aaPredicted RBP17.66■□□□□ 0.42
PKP3-209ENST00000533069 GTSE1Q9NYZ3 720 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 GCNT4Q9P109 453 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 DACH1Q9UI36 760 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 NDRG2Q9UN36 371 aaKnown RBP17.66■□□□□ 0.42
PKP3-209ENST00000533069 ARHGAP26Q9UNA1 814 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 COL4A3Q01955 1670 aa17.66■□□□□ 0.42
PKP3-209ENST00000533069 PIEZO1Q92508 2521 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms