RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 ZNF667Q5HYK9 610 aa18.97■□□□□ 0.63
SMG1-203ENST00000532700 VSTM1Q6UX27 236 aa18.97■□□□□ 0.63
SMG1-203ENST00000532700 ACOT1Q86TX2 421 aa18.97■□□□□ 0.63
SMG1-203ENST00000532700 GUF1Q8N442 669 aaKnown RBP18.97■□□□□ 0.63
SMG1-203ENST00000532700 TAS1R2Q8TE23 839 aa18.97■□□□□ 0.63
SMG1-203ENST00000532700 TTLL2Q9BWV7 592 aa18.97■□□□□ 0.63
SMG1-203ENST00000532700 POLR3BQ9NW08 1133 aaPredicted RBP18.97■□□□□ 0.63
SMG1-203ENST00000532700 WNT6Q9Y6F9 365 aa18.97■□□□□ 0.63
SMG1-203ENST00000532700 ATG2BQ96BY7 2078 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 ANTXRLA6NF34 631 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 BEST1O76090 585 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 ASS1P00966 412 aaKnown RBP18.96■□□□□ 0.63
SMG1-203ENST00000532700 DDX6P26196 483 aaKnown RBP eCLIP18.96■□□□□ 0.63
SMG1-203ENST00000532700 MAGEA9P43362 315 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 GCLMP48507 274 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 PGFP49763 221 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 VAMP7P51809 220 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 PMS1P54277 932 aaKnown RBP18.96■□□□□ 0.63
SMG1-203ENST00000532700 MLLT6P55198 1093 aaPredicted RBP18.96■□□□□ 0.63
SMG1-203ENST00000532700 IFRD2Q12894 506 aaPredicted RBP18.96■□□□□ 0.63
SMG1-203ENST00000532700 CCINQ13939 588 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 DENND5BQ6ZUT9 1274 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 FAM35AQ86V20 835 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 RALGPS2Q86X27 583 aaPredicted RBP18.96■□□□□ 0.63
SMG1-203ENST00000532700 FUKQ8N0W3 1084 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 DCLK2Q8N568 766 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 ZBTB44Q8NCP5 570 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 ZMIZ2Q8NF64 920 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 EZH1Q92800 747 aaPredicted RBP18.96■□□□□ 0.63
SMG1-203ENST00000532700 C8orf48Q96LL4 319 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 RNF38Q9H0F5 515 aa18.96■□□□□ 0.63
SMG1-203ENST00000532700 C8orf33Q9H7E9 229 aaPredicted RBP18.96■□□□□ 0.63
SMG1-203ENST00000532700 UXTQ9UBK9 157 aaPredicted RBP18.96■□□□□ 0.63
SMG1-203ENST00000532700 MYH10P35580 1976 aa18.95■□□□□ 0.62
SMG1-203ENST00000532700 CALUO43852 315 aaPredicted RBP18.95■□□□□ 0.62
SMG1-203ENST00000532700 CKMP06732 381 aa18.95■□□□□ 0.62
SMG1-203ENST00000532700 RUNX3Q13761 415 aa18.95■□□□□ 0.62
SMG1-203ENST00000532700 ZNF268Q14587 947 aaPredicted RBP18.95■□□□□ 0.62
SMG1-203ENST00000532700 MTF1Q14872 753 aa18.95■□□□□ 0.62
SMG1-203ENST00000532700 MAPRE1Q15691 268 aaKnown RBP18.95■□□□□ 0.62
SMG1-203ENST00000532700 NFIL3Q16649 462 aa18.95■□□□□ 0.62
SMG1-203ENST00000532700 ITPRIPL2Q3MIP1 535 aa18.95■□□□□ 0.62
SMG1-203ENST00000532700 ZNF528Q3MIS6 628 aa18.95■□□□□ 0.62
SMG1-203ENST00000532700 FSTL4Q6MZW2 842 aa18.95■□□□□ 0.62
SMG1-203ENST00000532700 SCAMP5Q8TAC9 235 aa18.95■□□□□ 0.62
SMG1-203ENST00000532700 LINC00597Q9H2U6 94 aa18.95■□□□□ 0.62
SMG1-203ENST00000532700 MMRN2Q9H8L6 949 aa18.95■□□□□ 0.62
SMG1-203ENST00000532700 EML5Q05BV3 1969 aa18.95■□□□□ 0.62
SMG1-203ENST00000532700 FRYLO94915 3013 aa18.95■□□□□ 0.62
SMG1-203ENST00000532700 TRAV19A0A0A6YYK7 116 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 ZNF840PA6NDX5 716 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 NCAM2O15394 837 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 LILRB5O75023 590 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 CLSTN1O94985 981 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 LMNAP02545 664 aaKnown RBP18.94■□□□□ 0.62
SMG1-203ENST00000532700 FAM163BP0C2L3 166 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 USP17L7P0C7H9 530 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 PIK3CAP42336 1068 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 PRCPP42785 496 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 NDST1P52848 882 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 AP3M2P53677 418 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 NOP14P78316 857 aaKnown RBP18.94■□□□□ 0.62
SMG1-203ENST00000532700 PLCB2Q00722 1185 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 FAM160A1Q05DH4 1040 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 TAF10Q12962 218 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 FAM186BQ8IYM0 893 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 C12orf29Q8N999 325 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 SH3RF2Q8TEC5 729 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 SEMA4DQ92854 862 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 SMOQ99835 787 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 KIF9Q9HAQ2 790 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 FAM49BQ9NUQ9 324 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 CHMP5Q9NZZ3 219 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 FRMD4BQ9Y2L6 1034 aa18.94■□□□□ 0.62
SMG1-203ENST00000532700 FAM186AA6NE01 2351 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 TRIM49BA6NDI0 452 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 K7ESF4 209 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 TNFRSF10BO14763 440 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 TRIM66O15016 1216 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 MAPK13O15264 365 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 ANXA13P27216 316 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 GAB4Q2WGN9 574 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 EML3Q32P44 896 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 GPRIN1Q7Z2K8 1008 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 WHAMMQ8TF30 809 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 WBP2Q969T9 261 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 ELOVL4Q9GZR5 314 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 KRT82Q9NSB4 513 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 THG1LQ9NWX6 298 aaKnown RBP18.93■□□□□ 0.62
SMG1-203ENST00000532700 GVINP1Q7Z2Y8 2422 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 ZNF292O60281 2723 aa18.93■□□□□ 0.62
SMG1-203ENST00000532700 OTOGLQ3ZCN5 2332 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 WDR87Q6ZQQ6 2873 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 RIF1Q5UIP0 2472 aaKnown RBP18.92■□□□□ 0.62
SMG1-203ENST00000532700 SOBPA7XYQ1 873 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 IKBKBO14920 756 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 GADD45BO75293 160 aaPredicted RBP18.92■□□□□ 0.62
SMG1-203ENST00000532700 OLFM2O95897 454 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 OAS1P00973 400 aaKnown RBP18.92■□□□□ 0.62
SMG1-203ENST00000532700 EGFP01133 1207 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms