RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 RALGPS2Q86X27 583 aaPredicted RBP18.33■□□□□ 0.52
PHRF1-204ENST00000532550 ERCC4Q92889 916 aaPredicted RBP18.33■□□□□ 0.52
PHRF1-204ENST00000532550 NKD2Q969F2 451 aaPredicted RBP18.33■□□□□ 0.52
PHRF1-204ENST00000532550 ZNF518BQ9C0D4 1074 aa18.33■□□□□ 0.52
PHRF1-204ENST00000532550 SDCBP2Q9H190 292 aa18.33■□□□□ 0.52
PHRF1-204ENST00000532550 OBSL1O75147 1896 aa18.33■□□□□ 0.52
PHRF1-204ENST00000532550 SPECC1L-ADORA2AF8WAN1 911 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 STX10O60499 249 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 KINO60870 393 aaKnown RBP18.32■□□□□ 0.52
PHRF1-204ENST00000532550 GTF2H1P32780 548 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 SOX9P48436 509 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 PDE6CP51160 858 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 NDST1P52848 882 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 USP46P62068 366 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 TNK2Q07912 1038 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 ITPRIPL2Q3MIP1 535 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 COBLL1Q53SF7 1204 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 KRT39Q6A163 491 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 UNC93AQ86WB7 457 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 ELOA2Q8IYF1 753 aaPredicted RBP18.32■□□□□ 0.52
PHRF1-204ENST00000532550 ZNF687Q8N1G0 1237 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 ARL14EPQ8N8R7 260 aaPredicted RBP18.32■□□□□ 0.52
PHRF1-204ENST00000532550 TTC16Q8NEE8 873 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 SPATA20Q8TB22 786 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 TAS1R2Q8TE23 839 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 EEF2KMTQ96G04 330 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 FAM83CQ9BQN1 747 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 TMEM8AQ9HCN3 771 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.32■□□□□ 0.523e-10■■■■■ 130.4
PHRF1-204ENST00000532550 FBXO4Q9UKT5 387 aa18.32■□□□□ 0.52
PHRF1-204ENST00000532550 CIZ1Q9ULV3 898 aaPredicted RBP18.32■□□□□ 0.52
PHRF1-204ENST00000532550 RIF1Q5UIP0 2472 aaKnown RBP18.31■□□□□ 0.52
PHRF1-204ENST00000532550 ANAPC1Q9H1A4 1944 aa18.31■□□□□ 0.52
PHRF1-204ENST00000532550 C2orf78A6NCI8 922 aa18.31■□□□□ 0.52
PHRF1-204ENST00000532550 ABL1P00519 1130 aa18.31■□□□□ 0.52
PHRF1-204ENST00000532550 CACNA2D1P54289 1103 aa18.31■□□□□ 0.52
PHRF1-204ENST00000532550 FKBP3Q00688 224 aaKnown RBP18.31■□□□□ 0.52
PHRF1-204ENST00000532550 CSTF1Q05048 431 aaKnown RBP18.31■□□□□ 0.52
PHRF1-204ENST00000532550 STIM1Q13586 685 aa18.31■□□□□ 0.52
PHRF1-204ENST00000532550 ZC3H14Q6PJT7 736 aaKnown RBP18.31■□□□□ 0.52
PHRF1-204ENST00000532550 NUP93Q8N1F7 819 aa18.31■□□□□ 0.52
PHRF1-204ENST00000532550 CRYBG2Q8N1P7 616 aa18.31■□□□□ 0.52
PHRF1-204ENST00000532550 SLITRK1Q96PX8 696 aa18.31■□□□□ 0.52
PHRF1-204ENST00000532550 SLC22A12Q96S37 553 aa18.31■□□□□ 0.52
PHRF1-204ENST00000532550 TTLL2Q9BWV7 592 aa18.31■□□□□ 0.52
PHRF1-204ENST00000532550 DNAI2Q9GZS0 605 aa18.31■□□□□ 0.52
PHRF1-204ENST00000532550 CYP3A43Q9HB55 503 aa18.31■□□□□ 0.52
PHRF1-204ENST00000532550 GCNT4Q9P109 453 aa18.31■□□□□ 0.52
PHRF1-204ENST00000532550 RTN3O95197 1032 aaPredicted RBP18.3■□□□□ 0.52
PHRF1-204ENST00000532550 PFKLP17858 780 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 YWHAQP27348 245 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 CTHP32929 405 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 ASPAP45381 313 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 MCCD1P59942 119 aaPredicted RBP18.3■□□□□ 0.52
PHRF1-204ENST00000532550 AMPD2Q01433 879 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 IFRD2Q12894 506 aaPredicted RBP18.3■□□□□ 0.52
PHRF1-204ENST00000532550 TAF10Q12962 218 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 MTAPQ13126 283 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 RUNX3Q13761 415 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 LRRC32Q14392 662 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 ZNF528Q3MIS6 628 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 ANKRD40Q6AI12 368 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 ISM2Q6H9L7 571 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 PAQR9Q6ZVX9 377 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 MAML2Q8IZL2 1156 aaPredicted RBP18.3■□□□□ 0.52
PHRF1-204ENST00000532550 ADSSL1Q8N142 457 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 SMARCD1Q96GM5 515 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 KCNK16Q96T55 309 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 CHRDQ9H2X0 955 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 SEMA4AQ9H3S1 761 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 EBF3Q9H4W6 596 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 DMAP1Q9NPF5 467 aaPredicted RBP18.3■□□□□ 0.52
PHRF1-204ENST00000532550 R4GN57 208 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 MYO15AQ9UKN7 3530 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 MYH10P35580 1976 aa18.3■□□□□ 0.52
PHRF1-204ENST00000532550 COL4A2P08572 1712 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 ZNF840PA6NDX5 716 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 PRR23AA6NEV1 266 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 AP1G2O75843 785 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 CHRNB1P11230 501 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 LRRC63Q05C16 580 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 ORC1Q13415 861 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 MTF1Q14872 753 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 PDGFRLQ15198 375 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 DGKKQ5KSL6 1271 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 TCERG1LQ5VWI1 586 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 TRIM68Q6AZZ1 485 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 ASCL5Q7RTU5 278 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 FAM35AQ86V20 835 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 IER2Q9BTL4 223 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 NT5C1AQ9BXI3 368 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 APOBEC3GQ9HC16 384 aaKnown RBP18.29■□□□□ 0.52
PHRF1-204ENST00000532550 TMEM30AQ9NV96 361 aa18.29■□□□□ 0.52
PHRF1-204ENST00000532550 USP34Q70CQ2 3546 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 PSMA7O14818 248 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 SLC16A3O15427 465 aaKnown RBP18.28■□□□□ 0.52
PHRF1-204ENST00000532550 GADD45BO75293 160 aaPredicted RBP18.28■□□□□ 0.52
PHRF1-204ENST00000532550 PPP1R2P41236 205 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 MXI1P50539 228 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 PPP2R5DQ14738 602 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms