RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 CRACR2AQ9BSW2 395 aa14.79□□□□□ -0.04
TSPAN4-220ENST00000532375 SIX2Q9NPC8 291 aa14.79□□□□□ -0.04
TSPAN4-220ENST00000532375 FANCLQ9NW38 375 aa14.79□□□□□ -0.04
TSPAN4-220ENST00000532375 MAGED2Q9UNF1 606 aaPredicted RBP14.79□□□□□ -0.04
TSPAN4-220ENST00000532375 CNTN6Q9UQ52 1028 aa14.79□□□□□ -0.04
TSPAN4-220ENST00000532375 SOBPA7XYQ1 873 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 KCNJ18B7U540 433 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 AP1G2O75843 785 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 PON1P27169 355 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 VIPR2P41587 438 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 MTIF2P46199 727 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 ZNF132P52740 706 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 SIGLEC14Q08ET2 396 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 CETN1Q12798 172 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 KCNJ12Q14500 433 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 VWA3BQ502W6 1294 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 GPR158Q5T848 1215 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 IER5LQ5T953 404 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 GJB7Q6PEY0 223 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 TRIM65Q6PJ69 517 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 APTXQ7Z2E3 356 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 MON1AQ86VX9 555 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 CREBRFQ8IUR6 639 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 ARID3BQ8IVW6 561 aaPredicted RBP14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 FAM114A1Q8IWE2 563 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 NUP93Q8N1F7 819 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 PPM1KQ8N3J5 372 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 SCAMP5Q8TAC9 235 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 SLC22A12Q96S37 553 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 MED10Q9BTT4 135 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 NDST4Q9H3R1 872 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 DMAP1Q9NPF5 467 aaPredicted RBP14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 SLC2A4RGQ9NR83 387 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 KRT82Q9NSB4 513 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 GCNT4Q9P109 453 aa14.78□□□□□ -0.04
TSPAN4-220ENST00000532375 FAM86C2PA6NEL3 165 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 LRRC10BA6NIK2 292 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 PRAMEF12O95522 483 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 ZNF18P17022 549 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 EEF1GP26641 437 aaKnown RBP14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 ADORA2BP29275 332 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 PGFP49763 221 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 GPC5P78333 572 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 TAF12Q16514 161 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 TXNDC8Q6A555 127 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 VITQ6UXI7 678 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 GBP6Q6ZN66 633 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 GPRIN1Q7Z2K8 1008 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 BMP8AQ7Z5Y6 402 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 GPIHBP1Q8IV16 184 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 TFAP2BQ92481 460 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 HEXIM2Q96MH2 286 aaKnown RBP14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 LRFN3Q9BTN0 628 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 C1QTNF1Q9BXJ1 281 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 DUSP16Q9BY84 665 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 ZFP14Q9HCL3 533 aa14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 UXTQ9UBK9 157 aaPredicted RBP14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 AJAP1Q9UKB5 411 aaPredicted RBP14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 KIF26AQ9ULI4 1882 aaPredicted RBP14.77□□□□□ -0.05
TSPAN4-220ENST00000532375 ATP8B3O60423 1300 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 COL4A2P08572 1712 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 ZNF840PA6NDX5 716 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 TMEM221A6NGB7 291 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 M0R296 226 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 CALCAP01258 141 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 ZDHHC11BP0C7U3 371 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 SRFP11831 508 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 ANXA13P27216 316 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 MAP3K7CLP57077 242 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 TAF10Q12962 218 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 KRT31Q15323 416 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 EXOC3L4Q17RC7 722 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 PKDCCQ504Y2 493 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 TMEM270Q6UE05 265 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 TTC30AQ86WT1 665 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 MFSD6LQ8IWD5 586 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 CMTM8Q8IZV2 173 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 MAB21L3Q8N8X9 362 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 RIN3Q8TB24 985 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 JAKMIP2Q96AA8 810 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 CYP2S1Q96SQ9 504 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 UBE2TQ9NPD8 197 aaPredicted RBP14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 COMMD8Q9NX08 183 aa14.76□□□□□ -0.05
TSPAN4-220ENST00000532375 KRBA1A5PL33 1030 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 C2orf78A6NCI8 922 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 SHISA7A6NL88 538 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 HEPACAM2A8MVW5 462 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 BECN2A8MW95 431 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 ARNTLO00327 626 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 O00370 1275 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 PDGFBP01127 241 aaPredicted RBP14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 PAEPP09466 180 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 FAM200BP0CF97 657 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 VDRP11473 427 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 NPR3P17342 541 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 DDX6P26196 483 aaKnown RBP eCLIP14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 YWHAQP27348 245 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 SLC5A3P53794 718 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 YWHAEP62258 255 aaKnown RBP14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 ZXDBP98169 803 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms