RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 MAP3K7CLP57077 242 aa18.48■□□□□ 0.55
CTSB-223ENST00000532370 TMEM105Q8N8V8 129 aa18.48■□□□□ 0.55
CTSB-223ENST00000532370 SLC4A11Q8NBS3 891 aa18.48■□□□□ 0.55
CTSB-223ENST00000532370 CYFIP2Q96F07 1278 aa18.48■□□□□ 0.55
CTSB-223ENST00000532370 FAXDC2Q96IV6 333 aa18.48■□□□□ 0.55
CTSB-223ENST00000532370 CNOT6LQ96LI5 555 aaKnown RBP18.48■□□□□ 0.55
CTSB-223ENST00000532370 CEP295NLQ96MC4 621 aa18.48■□□□□ 0.55
CTSB-223ENST00000532370 HEXIM2Q96MH2 286 aaKnown RBP18.48■□□□□ 0.55
CTSB-223ENST00000532370 HNRNPABQ99729 332 aaKnown RBP18.48■□□□□ 0.55
CTSB-223ENST00000532370 BRD9Q9H8M2 597 aa18.48■□□□□ 0.55
CTSB-223ENST00000532370 DMAP1Q9NPF5 467 aaPredicted RBP18.48■□□□□ 0.55
CTSB-223ENST00000532370 STK25O00506 426 aa18.47■□□□□ 0.55
CTSB-223ENST00000532370 DPYSL4O14531 572 aa18.47■□□□□ 0.55
CTSB-223ENST00000532370 TNFRSF10BO14763 440 aa18.47■□□□□ 0.55
CTSB-223ENST00000532370 AFPP02771 609 aaKnown RBP18.47■□□□□ 0.55
CTSB-223ENST00000532370 DDX6P26196 483 aaKnown RBP eCLIP18.47■□□□□ 0.55
CTSB-223ENST00000532370 WEE1P30291 646 aa18.47■□□□□ 0.55
CTSB-223ENST00000532370 AVPR1AP37288 418 aa18.47■□□□□ 0.55
CTSB-223ENST00000532370 TAF10Q12962 218 aa18.47■□□□□ 0.55
CTSB-223ENST00000532370 ASTLQ6HA08 431 aaPredicted RBP18.47■□□□□ 0.55
CTSB-223ENST00000532370 NUP93Q8N1F7 819 aa18.47■□□□□ 0.55
CTSB-223ENST00000532370 RIN3Q8TB24 985 aa18.47■□□□□ 0.55
CTSB-223ENST00000532370 DEPDC1BQ8WUY9 529 aa18.47■□□□□ 0.55
CTSB-223ENST00000532370 KAT5Q92993 513 aa18.47■□□□□ 0.55
CTSB-223ENST00000532370 USP13Q92995 863 aaPredicted RBP18.47■□□□□ 0.55
CTSB-223ENST00000532370 TMEM176AQ96HP8 235 aa18.47■□□□□ 0.55
CTSB-223ENST00000532370 ZFYVE19Q96K21 471 aa18.47■□□□□ 0.55
CTSB-223ENST00000532370 TBC1D17Q9HA65 648 aa18.47■□□□□ 0.55
CTSB-223ENST00000532370 HEBP1Q9NRV9 189 aa18.47■□□□□ 0.55
CTSB-223ENST00000532370 ZNF840PA6NDX5 716 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 ZNF263O14978 683 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 P4HA2O15460 535 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 CD72P21854 359 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 SLC5A3P53794 718 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 PFKPQ01813 784 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 FCHO2Q0JRZ9 810 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 MLF2Q15773 248 aaPredicted RBP18.46■□□□□ 0.55
CTSB-223ENST00000532370 HSP90AA4PQ58FG1 418 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 PPP1R26Q5T8A7 1209 aaPredicted RBP18.46■□□□□ 0.55
CTSB-223ENST00000532370 RBM43Q6ZSC3 357 aaKnown RBP18.46■□□□□ 0.55
CTSB-223ENST00000532370 UBR7Q8N806 425 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 ARL14EPQ8N8R7 260 aaPredicted RBP18.46■□□□□ 0.55
CTSB-223ENST00000532370 EHBP1Q8NDI1 1231 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 JAKMIP2Q96AA8 810 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 E2F7Q96AV8 911 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 CSNK1G1Q9HCP0 422 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 TRPM5Q9NZQ8 1165 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 GCNT4Q9P109 453 aa18.46■□□□□ 0.55
CTSB-223ENST00000532370 ARNTLO00327 626 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 ABL1P00519 1130 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 FAM200BP0CF97 657 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 YWHAQP27348 245 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 ERCC5P28715 1186 aaPredicted RBP18.45■□□□□ 0.54
CTSB-223ENST00000532370 CLCN5P51795 746 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 CETN1Q12798 172 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 TPD52L1Q16890 204 aaPredicted RBP18.45■□□□□ 0.54
CTSB-223ENST00000532370 CLEC20AQ6ZU45 233 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 RRAGAQ7L523 313 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 GPRIN1Q7Z2K8 1008 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 ARHGEF19Q8IW93 802 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 YAF2Q8IY57 180 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 PPM1KQ8N3J5 372 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 CELF5Q8N6W0 485 aaKnown RBP18.45■□□□□ 0.54
CTSB-223ENST00000532370 NT5C1BQ96P26 610 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 FOXQ1Q9C009 403 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 INTS2Q9H0H0 1204 aaKnown RBP18.45■□□□□ 0.54
CTSB-223ENST00000532370 TDP1Q9NUW8 608 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 CHORDC1Q9UHD1 332 aaPredicted RBP18.45■□□□□ 0.54
CTSB-223ENST00000532370 HCN4Q9Y3Q4 1203 aa18.45■□□□□ 0.54
CTSB-223ENST00000532370 TRAV19A0A0A6YYK7 116 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 SHISA7A6NL88 538 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 HHLA1C9JL84 531 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 TRIM21P19474 475 aaKnown RBP18.44■□□□□ 0.54
CTSB-223ENST00000532370 ACO1P21399 889 aaKnown RBP18.44■□□□□ 0.54
CTSB-223ENST00000532370 PGFP49763 221 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 STARD6P59095 220 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 TTC39CQ8N584 583 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 TTC16Q8NEE8 873 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 TTC8Q8TAM2 541 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 BPIFB1Q8TDL5 484 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 IRF7Q92985 503 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 FBXO32Q969P5 355 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 CRACR2AQ9BSW2 395 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 THAP9Q9H5L6 903 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 OBP2AQ9NY56 170 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 IL37Q9NZH6 218 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 EHD2Q9NZN4 543 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 DACH1Q9UI36 760 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 ZMYM5Q9UJ78 669 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 MTF2Q9Y483 593 aaPredicted RBP18.44■□□□□ 0.54
CTSB-223ENST00000532370 COL4A3Q01955 1670 aa18.44■□□□□ 0.54
CTSB-223ENST00000532370 SOBPA7XYQ1 873 aa18.43■□□□□ 0.54
CTSB-223ENST00000532370 CHADO15335 359 aa18.43■□□□□ 0.54
CTSB-223ENST00000532370 RTN3O95197 1032 aaPredicted RBP18.43■□□□□ 0.54
CTSB-223ENST00000532370 MBD3O95983 291 aa18.43■□□□□ 0.54
CTSB-223ENST00000532370 CALCAP01258 141 aa18.43■□□□□ 0.54
CTSB-223ENST00000532370 CKMP06732 381 aa18.43■□□□□ 0.54
CTSB-223ENST00000532370 HDCP19113 662 aa18.43■□□□□ 0.54
CTSB-223ENST00000532370 AOC1P19801 751 aa18.43■□□□□ 0.54
CTSB-223ENST00000532370 RFX1P22670 979 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms