RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 CBWD5Q5RIA9 395 aa24.41■■□□□ 1.5
CAPN1-222ENST00000532285 TPRG1Q6ZUI0 275 aa24.41■■□□□ 1.5
CAPN1-222ENST00000532285 PAQR9Q6ZVX9 377 aa24.41■■□□□ 1.5
CAPN1-222ENST00000532285 FAM35AQ86V20 835 aa24.41■■□□□ 1.5
CAPN1-222ENST00000532285 PJA1Q8NG27 643 aa24.41■■□□□ 1.5
CAPN1-222ENST00000532285 BPIFB1Q8TDL5 484 aa24.41■■□□□ 1.5
CAPN1-222ENST00000532285 SLC35C1Q96A29 364 aa24.41■■□□□ 1.5
CAPN1-222ENST00000532285 SMARCD1Q96GM5 515 aa24.41■■□□□ 1.5
CAPN1-222ENST00000532285 LRRC3BQ96PB8 259 aa24.41■■□□□ 1.5
CAPN1-222ENST00000532285 NT5C1AQ9BXI3 368 aa24.41■■□□□ 1.5
CAPN1-222ENST00000532285 FOXQ1Q9C009 403 aa24.41■■□□□ 1.5
CAPN1-222ENST00000532285 TDP1Q9NUW8 608 aa24.41■■□□□ 1.5
CAPN1-222ENST00000532285 TMEM30AQ9NV96 361 aa24.41■■□□□ 1.5
CAPN1-222ENST00000532285 HMGXB4Q9UGU5 601 aa24.41■■□□□ 1.5
CAPN1-222ENST00000532285 PPP3CCP48454 512 aa24.4■■□□□ 1.5
CAPN1-222ENST00000532285 USP46P62068 366 aa24.4■■□□□ 1.5
CAPN1-222ENST00000532285 TCF15Q12870 199 aa24.4■■□□□ 1.5
CAPN1-222ENST00000532285 ORC1Q13415 861 aa24.4■■□□□ 1.5
CAPN1-222ENST00000532285 CCDC40Q4G0X9 1142 aa24.4■■□□□ 1.5
CAPN1-222ENST00000532285 ZNF852Q6ZMS4 543 aa24.4■■□□□ 1.5
CAPN1-222ENST00000532285 FUKQ8N0W3 1084 aa24.4■■□□□ 1.5
CAPN1-222ENST00000532285 TTC39CQ8N584 583 aa24.4■■□□□ 1.5
CAPN1-222ENST00000532285 CSGALNACT1Q8TDX6 532 aa24.4■■□□□ 1.5
CAPN1-222ENST00000532285 NELL2Q99435 816 aa24.4■■□□□ 1.5
CAPN1-222ENST00000532285 OSBPL6Q9BZF3 934 aa24.4■■□□□ 1.5
CAPN1-222ENST00000532285 SMG9Q9H0W8 520 aaKnown RBP24.4■■□□□ 1.5
CAPN1-222ENST00000532285 IRF2BPLQ9H1B7 796 aa24.4■■□□□ 1.5
CAPN1-222ENST00000532285 KIF9Q9HAQ2 790 aa24.4■■□□□ 1.5
CAPN1-222ENST00000532285 THG1LQ9NWX6 298 aaKnown RBP24.4■■□□□ 1.5
CAPN1-222ENST00000532285 TRPM5Q9NZQ8 1165 aa24.4■■□□□ 1.5
CAPN1-222ENST00000532285 ARNTLO00327 626 aa24.39■■□□□ 1.49
CAPN1-222ENST00000532285 CILPO75339 1184 aa24.39■■□□□ 1.49
CAPN1-222ENST00000532285 GLULP15104 373 aa24.39■■□□□ 1.49
CAPN1-222ENST00000532285 CD58P19256 250 aa24.39■■□□□ 1.49
CAPN1-222ENST00000532285 ZNF268Q14587 947 aaPredicted RBP24.39■■□□□ 1.49
CAPN1-222ENST00000532285 CCDC105Q8IYK2 499 aa24.39■■□□□ 1.49
CAPN1-222ENST00000532285 NUP93Q8N1F7 819 aa24.39■■□□□ 1.49
CAPN1-222ENST00000532285 C12orf29Q8N999 325 aa24.39■■□□□ 1.49
CAPN1-222ENST00000532285 DTWD2Q8NBA8 298 aa24.39■■□□□ 1.49
CAPN1-222ENST00000532285 USP13Q92995 863 aaPredicted RBP24.39■■□□□ 1.49
CAPN1-222ENST00000532285 KCNK16Q96T55 309 aa24.39■■□□□ 1.49
CAPN1-222ENST00000532285 FAM124BQ9H5Z6 455 aaPredicted RBP24.39■■□□□ 1.49
CAPN1-222ENST00000532285 TRPC7Q9HCX4 862 aa24.39■■□□□ 1.49
CAPN1-222ENST00000532285 DMAP1Q9NPF5 467 aaPredicted RBP24.39■■□□□ 1.49
CAPN1-222ENST00000532285 MRPS17Q9Y2R5 130 aaKnown RBP24.39■■□□□ 1.49
CAPN1-222ENST00000532285 PATJQ8NI35 1801 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 TRAV19A0A0A6YYK7 116 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 MAN2B1O00754 1011 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 AP1G2O75843 785 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 RTN3O95197 1032 aaPredicted RBP24.38■■□□□ 1.49
CAPN1-222ENST00000532285 GNA14O95837 355 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 DCNP07585 359 aaKnown RBP24.38■■□□□ 1.49
CAPN1-222ENST00000532285 USP17L7P0C7H9 530 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 CCDC130P13994 396 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 PDE6CP51160 858 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 MLLT6P55198 1093 aaPredicted RBP24.38■■□□□ 1.49
CAPN1-222ENST00000532285 STX17P56962 302 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 PLCB2Q00722 1185 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 NHLH1Q02575 133 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 UBXN2BQ14CS0 331 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 SLC2A14Q8TDB8 520 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 TWNKQ96RR1 684 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 CLSTN2Q9H4D0 955 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 LTB4R2Q9NPC1 389 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 KRT82Q9NSB4 513 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 CCL26Q9Y258 94 aa24.38■■□□□ 1.49
CAPN1-222ENST00000532285 FAM170BA6NMN3 283 aa24.37■■□□□ 1.49
CAPN1-222ENST00000532285 PFKLP17858 780 aa24.37■■□□□ 1.49
CAPN1-222ENST00000532285 CD72P21854 359 aa24.37■■□□□ 1.49
CAPN1-222ENST00000532285 YWHAQP27348 245 aa24.37■■□□□ 1.49
CAPN1-222ENST00000532285 WHAMMQ8TF30 809 aa24.37■■□□□ 1.49
CAPN1-222ENST00000532285 TATDN2Q93075 761 aa24.37■■□□□ 1.49
CAPN1-222ENST00000532285 SLITRK1Q96PX8 696 aa24.37■■□□□ 1.49
CAPN1-222ENST00000532285 CYP2S1Q96SQ9 504 aa24.37■■□□□ 1.49
CAPN1-222ENST00000532285 HNRNPABQ99729 332 aaKnown RBP24.37■■□□□ 1.49
CAPN1-222ENST00000532285 FAM49BQ9NUQ9 324 aa24.37■■□□□ 1.49
CAPN1-222ENST00000532285 GCNT4Q9P109 453 aa24.37■■□□□ 1.49
CAPN1-222ENST00000532285 DLGAP2Q9P1A6 1054 aa24.37■■□□□ 1.49
CAPN1-222ENST00000532285 C2orf78A6NCI8 922 aa24.36■■□□□ 1.49
CAPN1-222ENST00000532285 PMM2O15305 246 aa24.36■■□□□ 1.49
CAPN1-222ENST00000532285 FGFR1OPO95684 399 aaKnown RBP24.36■■□□□ 1.49
CAPN1-222ENST00000532285 CKMP06732 381 aa24.36■■□□□ 1.49
CAPN1-222ENST00000532285 FMO5P49326 533 aa24.36■■□□□ 1.49
CAPN1-222ENST00000532285 TAF10Q12962 218 aa24.36■■□□□ 1.49
CAPN1-222ENST00000532285 CYFIP2Q96F07 1278 aa24.36■■□□□ 1.49
CAPN1-222ENST00000532285 MSANTD3Q96H12 275 aa24.36■■□□□ 1.49
CAPN1-222ENST00000532285 ZFYVE19Q96K21 471 aa24.36■■□□□ 1.49
CAPN1-222ENST00000532285 SLC22A12Q96S37 553 aa24.36■■□□□ 1.49
CAPN1-222ENST00000532285 SMOQ99835 787 aa24.36■■□□□ 1.49
CAPN1-222ENST00000532285 SRRTQ9BXP5 876 aaKnown RBP24.36■■□□□ 1.49
CAPN1-222ENST00000532285 CSNK1G1Q9HCP0 422 aa24.36■■□□□ 1.49
CAPN1-222ENST00000532285 CISHQ9NSE2 258 aa24.36■■□□□ 1.49
CAPN1-222ENST00000532285 COMMD8Q9NX08 183 aa24.36■■□□□ 1.49
CAPN1-222ENST00000532285 MTF2Q9Y483 593 aaPredicted RBP24.36■■□□□ 1.49
CAPN1-222ENST00000532285 PIAS3Q9Y6X2 628 aa24.36■■□□□ 1.49
CAPN1-222ENST00000532285 ZNF840PA6NDX5 716 aa24.35■■□□□ 1.49
CAPN1-222ENST00000532285 TNFRSF10BO14763 440 aa24.35■■□□□ 1.49
CAPN1-222ENST00000532285 NCAM2O15394 837 aa24.35■■□□□ 1.49
CAPN1-222ENST00000532285 FAM200BP0CF97 657 aa24.35■■□□□ 1.49
CAPN1-222ENST00000532285 HDCP19113 662 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms