RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 CNNM3Q8NE01 707 aa5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 FAM167AQ96KS9 214 aa5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 AGAP2Q99490 1192 aa5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 NRSN2Q9GZP1 204 aa5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 NUCKS1Q9H1E3 243 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 ST6GALNAC4Q9H4F1 302 aa5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 TIMMDC1Q9NPL8 285 aa5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 PSD3Q9NYI0 1048 aa5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 PCDHA6Q9UN73 950 aa5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 LIPT1Q9Y234 373 aa5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 WDR37Q9Y2I8 494 aa5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 PCDHA2Q9Y5H9 948 aa5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 CLDN16Q9Y5I7 305 aa5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 TTC21BQ7Z4L5 1316 aa5.57□□□□□ -1.52
ECHDC1-222ENST00000531967 LRRD1A4D1F6 860 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 TRIM43BA6NCK2 446 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 VWA5AO00534 786 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 KRT38O76015 456 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 RPLP2P05387 115 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 TPM3P06753 285 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 GJB1P08034 283 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 MYBL1P10243 752 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 PLS3P13797 630 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 SNX1Q13596 522 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 TRIM25Q14258 630 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 CPZQ66K79 652 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 PSAPL1Q6NUJ1 521 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 ZCCHC12Q6PEW1 402 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 INO80CQ6PI98 192 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 UNC13DQ70J99 1090 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 CHST3Q7LGC8 479 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 PRICKLE2Q7Z3G6 844 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 RAB44Q7Z6P3 723 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 SP8Q8IXZ3 490 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 PDCL2Q8N4E4 241 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 FRMD1Q8N878 549 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 VGLL2Q8N8G2 317 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 SPERTQ8NA61 448 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 RASSF8Q8NHQ8 419 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 NFKBIDQ8NI38 313 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 TRIM43Q96BQ3 446 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 NLRP4Q96MN2 994 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 LACRTQ9GZZ8 138 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 ISCUQ9H1K1 167 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 POFUT1Q9H488 388 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 GPAMQ9HCL2 828 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 DDX4Q9NQI0 724 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 RRAGDQ9NQL2 400 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 CNNM1Q9NRU3 951 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 GLRX2Q9NS18 164 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 SLC35D1Q9NTN3 355 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 COX16Q9P0S2 106 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 DERAQ9Y315 318 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 B3GALT1Q9Y5Z6 326 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 IGSF1Q8N6C5 1336 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 KIF16BQ96L93 1317 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 KIF21BO75037 1637 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 VWA3AA6NCI4 1184 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 C2orf71A6NGG8 1288 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 H0Y8X5 98 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 SCDO00767 359 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 ZNF263O14978 683 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 MYO1BO43795 1136 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 NMT2O60551 498 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 WFS1O76024 890 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 ZIC2O95409 532 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 PDGFRAP16234 1089 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 LTKP29376 864 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 IDUAP35475 653 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 GNL1P36915 607 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 ATP8B2P98198 1209 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 SPEM2Q0P670 501 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 RCN2Q14257 317 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 EPHA7Q15375 998 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 C12orf60Q5U649 245 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 KRT80Q6KB66 452 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 SLC25A24Q6NUK1 477 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 MARK2Q7KZI7 788 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 LRRC8DQ7L1W4 858 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 LINC00346Q8IVM7 164 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 CCDC150Q8NCX0 1101 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 ZNF384Q8TF68 577 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 PPP1R13LQ8WUF5 828 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 MR1Q95460 341 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 FUZQ9BT04 418 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 DSCC1Q9BVC3 393 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 NACAP1Q9BZK3 213 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 SMARCAD1Q9H4L7 1026 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 ZFAND3Q9H8U3 227 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 G6PC2Q9NQR9 355 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 GFOD1Q9NXC2 390 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 ZDHHC7Q9NXF8 308 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 HMG20BQ9P0W2 317 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 CLEC1BQ9P126 229 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 TMPRSS11EQ9UL52 423 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 COL17A1Q9UMD9 1497 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 ZNF281Q9Y2X9 895 aa5.56□□□□□ -1.52
ECHDC1-222ENST00000531967 KDRP35968 1356 aa5.55□□□□□ -1.52
ECHDC1-222ENST00000531967 CTAGE15A4D2H0 777 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms