RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 SSPNQ14714 243 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 PUM3Q15397 648 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 STILQ15468 1287 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 TSC22D1Q15714 1073 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 LETM2Q2VYF4 491 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 P3H1Q32P28 736 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 ANKRD20A8PQ5CZ79 823 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 ANKRD20A2Q5SQ80 823 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 ANKRD20A1Q5TYW2 823 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 ANKRD20A3Q5VUR7 823 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 FYB2Q5VWT5 728 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 HLA-DQA1Q5Y7H0 255 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 ANO7Q6IWH7 933 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 CEP85Q6P2H3 762 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 CRTC3Q6UUV7 619 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 BNIPLQ7Z465 357 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 MILR1Q7Z6M3 343 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 ITIH5Q86UX2 942 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 JAZF1Q86VZ6 243 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 ZNF227Q86WZ6 799 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 WFDC3Q8IUB2 231 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 KSR1Q8IVT5 923 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 FAM9CQ8IZT9 166 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 LILRA2Q8N149 483 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 PCSK9Q8NBP7 692 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 PDZD8Q8NEN9 1154 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 PJA1Q8NG27 643 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 FNDC8Q8TC99 324 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 CALML6Q8TD86 181 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 RASSF5Q8WWW0 418 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 ZNF274Q96GC6 653 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 CNDP2Q96KP4 475 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 IFT74Q96LB3 600 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 GBP5Q96PP8 586 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 NELL2Q99435 816 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 KIFC3Q9BVG8 833 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 SPATA9Q9BWV2 254 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 SPATA16Q9BXB7 569 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 SLC12A9Q9BXP2 914 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 NKX2-4Q9H2Z4 354 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 RAD21L1Q9H4I0 556 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 KAT14Q9H8E8 782 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 DIABLOQ9NR28 239 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 MRGBPQ9NV56 204 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 C9orf78Q9NZ63 289 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 SLAMF8Q9P0V8 285 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 APEX2Q9UBZ4 518 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 KCNN3Q9UGI6 736 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 ZMYM5Q9UJ78 669 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 EDARQ9UNE0 448 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 RPL26L1Q9UNX3 145 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 DNM3Q9UQ16 869 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 APOBEC2Q9Y235 224 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 CAB39Q9Y376 341 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 BACE2Q9Y5Z0 518 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 EID1Q9Y6B2 187 aa5.06□□□□□ -1.6
ECHDC1-221ENST00000531582 MYH13Q9UKX3 1938 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 RIMBP3CA6NJZ7 1639 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 RIMBP3BA6NNM3 1639 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 RIMBP3Q9UFD9 1639 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 C1orf232A0A0U1RR37 186 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 SMIM31A0A1B0GVY4 71 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 MAGEB16A2A368 324 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 CCDC85CA6NKD9 419 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 GOLGA8JA6NMD2 632 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 A8MVJ9 347 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 WASH4PA8MWX3 477 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 E9PBE3 544 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 AURKAO14965 403 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 AREL1O15033 823 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 HDAC3O15379 428 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 HNRNPRO43390 633 aaKnown RBP5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 PEX1O43933 1283 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 ACSL4O60488 711 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 MAFO75444 373 aaPredicted RBP5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 CD4P01730 458 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 ABCB1P08183 1280 aaPredicted RBP5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 RPS17P08708 135 aaKnown RBP5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 EEF2P13639 858 aaKnown RBP5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 P4HA1P13674 534 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 ACAT1P24752 427 aaKnown RBP5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 CD96P40200 585 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 RGS2P41220 211 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 ARHGDIBP52566 201 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 GNGT1P63211 74 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 KRT85P78386 507 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 TMPRSS15P98073 1019 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 PRKCEQ02156 737 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 RELAQ04206 551 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 ZBTB16Q05516 673 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 MAP3K12Q12852 859 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 DCTN2Q13561 401 aaKnown RBP5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 SNX17Q15036 470 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 NR0B2Q15466 257 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 CLUL1Q15846 466 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 PPP6R3Q5H9R7 873 aaPredicted RBP5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 MAP3K21Q5TCX8 1036 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 C12orf60Q5U649 245 aa5.05□□□□□ -1.6
ECHDC1-221ENST00000531582 BTBD8Q5XKL5 378 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms