RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 ZDHHC4Q9NPG8 344 aa11.46□□□□□ -0.57
TM9SF1-210ENST00000530563 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.46□□□□□ -0.57
TM9SF1-210ENST00000530563 GTF3C4Q9UKN8 822 aa11.46□□□□□ -0.57
TM9SF1-210ENST00000530563 ATMQ13315 3056 aa11.46□□□□□ -0.58
TM9SF1-210ENST00000530563 ASXL3Q9C0F0 2248 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 PLXNB3Q9ULL4 1909 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 LEFTY2O00292 366 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 MAP3K13O43283 966 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 HCRTO43612 131 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 ALDH1A2O94788 518 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 KAT7O95251 611 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 ZIC2O95409 532 aaPredicted RBP11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 SCP2P22307 547 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 ACAT1P24752 427 aaKnown RBP11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 ADSSP30520 456 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 TIE1P35590 1138 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 DPP6P42658 865 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 NEK4P51957 841 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 TSPY1Q01534 308 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 POU5F1Q01860 360 aaKnown RBP11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 DHCR24Q15392 516 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 ZRSR1Q15695 479 aaKnown RBP11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 DUOXA1Q1HG43 343 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 HSF5Q4G112 596 aaPredicted RBP11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 INTS6LQ5JSJ4 861 aaKnown RBP11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 LIMS2Q7Z4I7 341 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 FILIP1Q7Z7B0 1213 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 TTC30AQ86WT1 665 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 MINDY1Q8N5J2 469 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 KIAA1958Q8N8K9 716 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 CEP76Q8TAP6 659 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 HMGB4Q8WW32 186 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 ADAMTS14Q8WXS8 1223 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 PNKPQ96T60 521 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 LLPHQ9BRT6 129 aaKnown RBP11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 GTPBP2Q9BX10 602 aaKnown RBP11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 RNF38Q9H0F5 515 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 CD248Q9HCU0 757 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 DNAAF2Q9NVR5 837 aaKnown RBP11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 DDX43Q9NXZ2 648 aaKnown RBP11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 ODF2LQ9ULJ1 636 aa11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 NOL7Q9UMY1 257 aaKnown RBP11.45□□□□□ -0.58
TM9SF1-210ENST00000530563 ARHGAP33O14559 1287 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 GABRDO14764 452 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 SH3BP5O60239 455 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 OPHN1O60890 802 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 OLFM2O95897 454 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 CFIP05156 583 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 EIF2DP41214 584 aaKnown RBP11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 MAGEA11P43364 429 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 TNFRSF4P43489 277 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 USP46P62068 366 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 SLC7A9P82251 487 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 ATP2C1P98194 919 aaPredicted RBP11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 GFPT1Q06210 699 aaPredicted RBP11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 TRIP6Q15654 476 aaKnown RBP11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 SV2CQ496J9 727 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 ADALQ6DHV7 355 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 FAM171BQ6P995 826 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 SLC41A1Q8IVJ1 513 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 CCDC83Q8IWF9 413 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 DEFB119Q8N690 84 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 MYCT1Q8N699 235 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 C1orf127Q8N9H9 656 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 ZSWIM2Q8NEG5 633 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 FAM84AQ96KN4 292 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 SPACA7Q96KW9 195 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 POLMQ9NP87 494 aaPredicted RBP11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 GDAP2Q9NXN4 497 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 MGAQ8IWI9 3026 aa11.44□□□□□ -0.58
TM9SF1-210ENST00000530563 HELZP42694 1942 aaKnown RBP11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 TCHHQ07283 1943 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 TCRBV21S2A2A0A5A6 115 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 ZNF840PA6NDX5 716 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 MYMKA6NI61 221 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 K7ENM7 598 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 TRAK2O60296 914 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 CBFA2T3O75081 653 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 FTH1P19P0C7X4 201 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 PFKLP17858 780 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 GABRG2P18507 467 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 RDXP35241 583 aaKnown RBP11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 GRIA2P42262 883 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 ZNF33AQ06730 810 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 SLC14A1Q13336 389 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 BYSLQ13895 437 aaKnown RBP11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 HNRNPDQ14103 355 aaKnown RBP11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 KCNB1Q14721 858 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 EOGTQ5NDL2 527 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 SLCO6A1Q86UG4 719 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 HDDC3Q8N4P3 179 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 PNPLA1Q8N8W4 532 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 FSIP1Q8NA03 581 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 MDM1Q8TC05 714 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 SPATA18Q8TC71 538 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 FUBP3Q96I24 572 aaKnown RBP eCLIP11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 SPATA17Q96L03 361 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 TTLL2Q9BWV7 592 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 ST6GALNAC4Q9H4F1 302 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 CCDC86Q9H6F5 360 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms